Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 AC090515.3-201ENST00000560431 315 ntBASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 MIR3167-201ENST00000579623 85 ntBASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.4□□□□□ -1.54
FOXP3Q9BZS1 AL049780.3-201ENST00000624612 1583 ntBASIC5.4□□□□□ -1.55
FOXP3Q9BZS1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
FOXP3Q9BZS1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.4□□□□□ -1.55
FOXP3Q9BZS1 AC134882.1-201ENST00000603738 1676 ntBASIC5.4□□□□□ -1.55
FOXP3Q9BZS1 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.4□□□□□ -1.55
FOXP3Q9BZS1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
FOXP3Q9BZS1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RNU6-1120P-201ENST00000362988 108 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RNU6-343P-201ENST00000364709 104 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 Y_RNA.419-201ENST00000384041 102 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 Y_RNA.431-201ENST00000384086 102 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RNU1-74P-201ENST00000384108 171 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RNU6-921P-201ENST00000384361 107 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RN7SKP32-201ENST00000410167 303 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RN7SKP16-201ENST00000410180 299 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC013429.2-201ENST00000418798 781 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 MTCO3P46-201ENST00000425787 232 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 GSTM5P1-201ENST00000434751 660 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC016691.1-201ENST00000441321 413 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC105399.1-202ENST00000447303 205 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC233279.1-201ENST00000455300 423 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RPS27AP17-201ENST00000463344 455 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RN7SL189P-201ENST00000468631 289 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC007537.2-201ENST00000472093 511 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC073073.1-201ENST00000493920 463 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC090453.1-201ENST00000495560 436 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 SOD1P3-201ENST00000518682 454 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AP003072.2-201ENST00000527756 676 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 OR5B19P-201ENST00000531766 928 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 BNIP3P1-201ENST00000547295 580 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC009117.1-201ENST00000563948 554 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AL355375.2-201ENST00000574825 175 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 LARP7P2-201ENST00000575306 125 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC024940.4-201ENST00000605507 246 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC000068.2-201ENST00000608816 460 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AL365204.3-201ENST00000612448 685 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.39□□□□□ -1.55
FOXP3Q9BZS1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 RNU4-1-201ENST00000363925 141 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 RNU6-1158P-201ENST00000391167 107 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 PRRC2CP1-201ENST00000404428 159 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 RNA5SP487-201ENST00000410186 122 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 RNU6-1068P-201ENST00000410958 103 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 MTND2P23-201ENST00000422990 651 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 RPL36AP53-201ENST00000432891 316 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 BTF3P6-201ENST00000448054 499 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC104563.1-201ENST00000476147 376 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC034222.1-201ENST00000494052 532 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 SNORA19.2-201ENST00000516013 114 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 RNU6-277P-201ENST00000516272 106 ntBASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXP3Q9BZS1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms