Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RTFDC1Q9BY42 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 Z95331.1-201ENST00000623075 23112 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 RNVU1-3-201ENST00000364313 161 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC016769.3-201ENST00000396562 315 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MIR1302-8-201ENST00000408342 128 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 CYCSP10-201ENST00000417973 294 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 RPL31P45-201ENST00000419532 356 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 FNDC3CP-201ENST00000420795 1155 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 ZYG11AP1-201ENST00000430329 837 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 HMGB3P9-201ENST00000441799 583 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AL031584.1-201ENST00000447169 754 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 USP9YP34-201ENST00000453983 808 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MTND3P7-201ENST00000474435 343 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 DSTNP2-201ENST00000504533 515 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC113430.1-201ENST00000506872 718 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC109458.1-201ENST00000508858 316 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 HMGB3P13-201ENST00000511263 607 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC104986.1-201ENST00000517978 436 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC068587.4-201ENST00000533893 186 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 OR8L1P-201ENST00000534005 955 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MAGOH2P-202ENST00000584384 429 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 NBR2-204ENST00000587322 63 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AL606490.9-201ENST00000603331 271 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC112230.1-201ENST00000604342 547 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC025588.4-201ENST00000615802 908 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 BMS1P21-201ENST00000634565 365 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AL513185.3-201ENST00000433335 1300 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MAPK10-372ENST00000641954 3413 ntBASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RTFDC1Q9BY42 MAPK10-349ENST00000641767 3661 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 ELL2P3-201ENST00000457883 1602 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 RNU6-356P-201ENST00000384140 107 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 ARF4P3-201ENST00000397387 509 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC098826.1-201ENST00000433943 471 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 ISCA1P2-201ENST00000438679 421 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 PAXBP1P1-201ENST00000449315 447 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC009961.3-201ENST00000449832 765 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 MTCYBP43-201ENST00000513621 740 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 RNU6-150P-201ENST00000516237 95 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC136618.2-201ENST00000575091 400 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC110760.3-201ENST00000598794 467 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 YWHAQP7-201ENST00000603536 658 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 AC009090.3-201ENST00000616553 565 ntBASIC5.13□□□□□ -1.59
RTFDC1Q9BY42 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms