Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL513477.1-202ENST00000417061 214 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 RWDD4P2-201ENST00000426392 563 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 NDUFS5P3-201ENST00000450668 321 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 RN7SL330P-201ENST00000469709 307 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 RWDD4P1-201ENST00000488019 565 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC092185.1-201ENST00000491371 97 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC005351.1-201ENST00000511152 786 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 FAM60DP-201ENST00000524174 632 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AL158827.2-201ENST00000602494 330 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AC006111.3-201ENST00000622137 383 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 AL691447.3-201ENST00000635020 330 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCAPERQ9BY12 TAB3P1-202ENST00000452645 1634 ntBASIC4.13□□□□□ -1.75
SCAPERQ9BY12 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 MIR365B-201ENST00000362317 111 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 SNORA62.2-201ENST00000364672 152 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 RN7SKP192-201ENST00000411291 327 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 UBE2D3P1-201ENST00000436669 444 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 RPL23AP15-201ENST00000450202 459 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 RPL23AP23-201ENST00000452590 471 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 RN7SKP58-201ENST00000411010 305 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 BX276092.3-201ENST00000424182 230 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 SNRPGP5-201ENST00000456003 220 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 RPL7P20-201ENST00000520308 745 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AP003102.1-201ENST00000525638 661 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AL845331.3-202ENST00000562856 261 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 AC006254.3-201ENST00000603353 884 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 CTSLP2-204ENST00000629029 392 ntBASIC4.12□□□□□ -1.75
SCAPERQ9BY12 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCAPERQ9BY12 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 RPL31P1-201ENST00000398116 372 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 RNA5SP239-201ENST00000410218 129 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 AIMP1P1-201ENST00000418670 937 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 RPL7P53-201ENST00000421245 739 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 ARF4P2-201ENST00000430209 526 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 AC099063.2-201ENST00000446360 662 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 UQCRHP3-201ENST00000451503 251 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 RNA5SP282-201ENST00000516355 108 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 AC245166.1-201ENST00000521012 253 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 TRAV37-201ENST00000553906 342 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 AC009039.2-201ENST00000624524 529 ntBASIC4.11□□□□□ -1.75
SCAPERQ9BY12 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.11□□□□□ -1.75
SCAPERQ9BY12 AC092079.1-201ENST00000558620 1985 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC093775.1-201ENST00000624154 1868 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 SNORA79B-201ENST00000410557 148 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC112220.1-201ENST00000434628 355 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 OR5H5P-201ENST00000503164 928 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 IGKV3-31-201ENST00000523109 329 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AL356274.1-201ENST00000617064 410 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC025034.2-201ENST00000623264 286 ntBASIC4.1□□□□□ -1.75
SCAPERQ9BY12 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SCAPERQ9BY12 AC092593.1-201ENST00000515413 1815 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms