Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.51□□□□□ -1.85
SSX3Q99909 AADACP1-206ENST00000561502 1193 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 RPL23AP97-201ENST00000568955 471 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 AC124312.4-201ENST00000605533 310 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AC027449.1-201ENST00000608890 407 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 AP001521.1-201ENST00000609150 300 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 MIR486-1-201ENST00000612171 68 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX3Q99909 PLCE1P1-201ENST00000622094 305 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SSX3Q99909 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX3Q99909 AL158163.1-201ENST00000603915 1649 ntBASIC3.51□□□□□ -1.85
SSX3Q99909 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX3Q99909 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
SSX3Q99909 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 RNU1-132P-201ENST00000364300 164 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 RN7SKP227-201ENST00000364445 330 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SSX3Q99909 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 AL356320.2-201ENST00000417263 507 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AL139095.3-201ENST00000419672 1203 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AL513175.2-201ENST00000422071 443 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.5□□□□□ -1.85
SSX3Q99909 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.5□□□□□ -1.85
SSX3Q99909 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 RPL23AP52-201ENST00000439311 478 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX3Q99909 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 RPS20P24-201ENST00000457473 361 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC092757.1-201ENST00000467293 467 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC011979.1-201ENST00000472300 483 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC010460.2-201ENST00000509054 677 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 AC021146.1-201ENST00000511202 716 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 RNU6-1231P-201ENST00000517185 103 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX3Q99909 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX3Q99909 OR4P1P-201ENST00000530808 1136 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX3Q99909 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX3Q99909 AL160290.3-201ENST00000604869 165 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 Z98200.1-201ENST00000607298 470 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC106052.1-201ENST00000608029 497 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 AL021997.2-201ENST00000615674 271 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 AL445567.2-201ENST00000618935 498 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC073348.1-201ENST00000623002 331 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC007546.2-201ENST00000623996 360 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 MIR3653-201ENST00000625572 110 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.5□□□□□ -1.85
SSX3Q99909 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 AC099786.3-201ENST00000565735 1410 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX3Q99909 MTND4P34-201ENST00000572715 1371 ntBASIC3.5□□□□□ -1.85
SSX3Q99909 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX3Q99909 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX3Q99909 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSX3Q99909 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SSX3Q99909 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SSX3Q99909 MIR383-201ENST00000362257 73 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 RNU6-906P-201ENST00000384700 70 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 MIR506-201ENST00000384998 124 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 RPS26P8-201ENST00000393490 348 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 NRBF2P2-201ENST00000413087 861 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX3Q99909 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX3Q99909 AIMP1P1-201ENST00000418670 937 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 EIF1P3-201ENST00000423841 334 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.49□□□□□ -1.85
SSX3Q99909 AL512326.1-201ENST00000443050 721 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 VN1R10P-201ENST00000447106 875 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 SLC31A1P1-201ENST00000451221 567 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AC103987.1-201ENST00000473394 348 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX3Q99909 RPL35P6-201ENST00000490024 372 ntBASIC3.49□□□□□ -1.85
SSX3Q99909 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.49□□□□□ -1.85
SSX3Q99909 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms