Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.07□□□□□ -1.76
PKP4Q99569 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 AC005539.1-201ENST00000443768 1479 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 LARP1BP1-201ENST00000506036 1359 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.07□□□□□ -1.76
PKP4Q99569 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 MIR383-201ENST00000362257 73 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 OR6C69P-201ENST00000394268 893 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.07□□□□□ -1.76
PKP4Q99569 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RAC1P3-201ENST00000416129 580 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 IFNNP1-201ENST00000429219 553 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC244035.1-201ENST00000430042 390 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.07□□□□□ -1.76
PKP4Q99569 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 CKS1BP5-201ENST00000434172 273 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AL591503.2-201ENST00000442314 1005 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 TAF9P1-201ENST00000445421 515 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.07□□□□□ -1.76
PKP4Q99569 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.07□□□□□ -1.76
PKP4Q99569 RPL12P26-201ENST00000452430 487 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 TAF9P2-201ENST00000454958 515 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.07□□□□□ -1.76
PKP4Q99569 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.07□□□□□ -1.76
PKP4Q99569 RPL23AP2-201ENST00000471227 466 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RN7SL860P-201ENST00000473738 223 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RPL7P18-201ENST00000478965 734 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RNF138P1-201ENST00000502765 546 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC099522.1-202ENST00000514718 367 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RNU6-202P-201ENST00000515998 96 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
PKP4Q99569 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.07□□□□□ -1.76
PKP4Q99569 CYCSP29-201ENST00000533731 318 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.07□□□□□ -1.76
PKP4Q99569 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.07□□□□□ -1.76
PKP4Q99569 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 AL391156.1-201ENST00000554965 554 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 MIR4504-201ENST00000577413 92 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC023575.1-201ENST00000580510 358 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.07□□□□□ -1.76
PKP4Q99569 DEFB131E-202ENST00000602581 683 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 RN7SKP299-201ENST00000606679 301 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC092653.1-201ENST00000608509 531 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC245297.2-201ENST00000610119 565 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 MLECP1-201ENST00000615893 709 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AC138649.5-201ENST00000637456 137 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 AL392088.2-201ENST00000637607 285 ntBASIC4.07□□□□□ -1.76
PKP4Q99569 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.07□□□□□ -1.76
PKP4Q99569 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.07□□□□□ -1.76
PKP4Q99569 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PKP4Q99569 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PKP4Q99569 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
PKP4Q99569 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PKP4Q99569 OR1L1-202ENST00000373686 1083 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PKP4Q99569 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PKP4Q99569 RNU6-444P-201ENST00000383988 108 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 RNU6-1200P-201ENST00000384162 107 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AL031577.2-201ENST00000404133 280 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 MIR1183-201ENST00000408856 89 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 Y_RNA.619-201ENST00000410951 90 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.06□□□□□ -1.76
PKP4Q99569 BTF3P10-201ENST00000433415 495 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AL353706.1-201ENST00000436728 494 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 USP9YP22-201ENST00000438971 294 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 RAB11AP1-201ENST00000442978 646 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.06□□□□□ -1.76
PKP4Q99569 MTCO2P25-201ENST00000447065 681 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 RPS15AP1-201ENST00000457423 391 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC010469.1-201ENST00000463864 576 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 GAPDHP39-201ENST00000481866 979 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.06□□□□□ -1.76
PKP4Q99569 AC006499.6-201ENST00000511169 607 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.06□□□□□ -1.76
PKP4Q99569 AC010587.2-201ENST00000511727 448 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 HNRNPKP5-201ENST00000515300 253 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 RNU6-416P-201ENST00000516265 103 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.06□□□□□ -1.76
PKP4Q99569 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.06□□□□□ -1.76
PKP4Q99569 AP001317.1-201ENST00000531194 960 ntBASIC4.06□□□□□ -1.76
PKP4Q99569 AL121766.1-201ENST00000547436 487 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms