Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC104651.2-201ENST00000447549 528 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 PAXBP1P1-201ENST00000449315 447 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 TRBV26-201ENST00000456572 344 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC004924.1-201ENST00000480160 781 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 RPL9P6-201ENST00000492764 598 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 NDUFB4P2-201ENST00000509515 391 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 RNU6-314P-201ENST00000516574 104 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC104986.1-201ENST00000517978 436 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 MTCO3P24-201ENST00000572729 782 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC137800.2-201ENST00000574375 120 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 MIR4307-201ENST00000582802 84 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AL513477.2-201ENST00000607858 568 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC090970.3-201ENST00000612566 866 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 MIR6798-201ENST00000612887 67 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 U4.5-201ENST00000617137 123 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 MIR6864-201ENST00000617935 70 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX18Q96RF0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX18Q96RF0 MTND5P28-201ENST00000438005 1594 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX18Q96RF0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX18Q96RF0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
SNX18Q96RF0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.34□□□□□ -1.72
SNX18Q96RF0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.34□□□□□ -1.72
SNX18Q96RF0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNX18Q96RF0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNX18Q96RF0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 INTS6P1-201ENST00000504674 2530 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC004520.1-201ENST00000608362 1413 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 RNU6-533P-201ENST00000384144 107 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 Y_RNA.554-201ENST00000384672 102 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC016769.3-201ENST00000396562 315 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AL357515.1-201ENST00000402967 542 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 TBCAP2-201ENST00000416175 326 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 ARPC3P5-201ENST00000448802 534 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AL590365.1-201ENST00000450788 243 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC098824.1-201ENST00000453565 980 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 snoU13.7-201ENST00000459220 104 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 snoU109.1-201ENST00000459339 135 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 APOOP2-201ENST00000461561 539 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 MTCO3P38-201ENST00000468910 766 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC106872.3-201ENST00000495104 446 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC108941.1-201ENST00000502853 530 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC105252.1-201ENST00000503089 286 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 RNA5SP228-201ENST00000516232 133 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC092325.1-201ENST00000566449 554 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 MIR4691-201ENST00000583764 85 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC022916.3-201ENST00000592961 742 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC011487.3-201ENST00000593607 453 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC112191.3-201ENST00000604371 277 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AL022154.1-201ENST00000604698 785 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AP001521.2-201ENST00000608772 546 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC109347.2-201ENST00000610220 349 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 AC090517.2-201ENST00000614966 680 ntBASIC4.33□□□□□ -1.72
SNX18Q96RF0 U6.42-201ENST00000618440 107 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms