Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CCDC85AQ96PX6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC85AQ96PX6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC85AQ96PX6 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC85AQ96PX6 AC114947.2-201ENST00000565748 2125 ntBASIC6.67□□□□□ -1.34
CCDC85AQ96PX6 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC85AQ96PX6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AP004289.2-201ENST00000444413 1457 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 RNU6-28P-201ENST00000362378 107 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 SNORD116-29-201ENST00000384516 83 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 RNU6-441P-201ENST00000384545 106 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 HSPA8P15-201ENST00000401676 786 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AL645733.1-201ENST00000402250 217 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 RNA5SP487-201ENST00000410186 122 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 CHIAP3-201ENST00000423668 1133 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC093655.2-201ENST00000425735 631 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC096632.1-201ENST00000427395 310 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 PPIAP13-201ENST00000434706 478 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 RPS20P5-201ENST00000434808 360 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 KRT8P51-201ENST00000438938 274 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 CEACAMP7-201ENST00000444105 496 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 GAPDHP25-201ENST00000447061 1001 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC073850.1-201ENST00000449243 255 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC091685.2-201ENST00000454924 864 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 TRBV26-201ENST00000456572 344 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 snoU13.20-201ENST00000459180 104 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC012181.1-201ENST00000479895 423 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AK3P4-201ENST00000504283 583 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 RPS4XP20-201ENST00000505751 772 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 TTC39CP1-201ENST00000512513 755 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 SNORD27.1-201ENST00000516319 72 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 CYCSP28-201ENST00000534284 321 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 7SK.7-201ENST00000603504 247 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC019193.3-201ENST00000609144 554 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC079597.1-201ENST00000624306 508 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 MTND4LP32-201ENST00000636111 270 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 AC107081.3-201ENST00000612715 2034 ntBASIC6.66□□□□□ -1.34
CCDC85AQ96PX6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 U3.10-201ENST00000364459 214 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 SNORA22B-201ENST00000383876 138 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 MIR550A3-201ENST00000390735 95 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AL590399.2-201ENST00000427536 309 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 FAM206BP-201ENST00000510179 541 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 Y_RNA.720-201ENST00000517166 92 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 MIR4700-201ENST00000578311 74 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 AL133216.2-202ENST00000634512 349 ntBASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CCDC85AQ96PX6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 MTND5P33-201ENST00000571250 1450 ntBASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 AC015799.1-201ENST00000622996 3122 ntBASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CCDC85AQ96PX6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC85AQ96PX6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC85AQ96PX6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CCDC85AQ96PX6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms