Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORD65.1-201ENST00000390889 71 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 EI24P2-201ENST00000397776 1076 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 OR1AA1P-201ENST00000419597 916 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 USP9YP21-201ENST00000420603 432 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 RPL23AP31-201ENST00000456160 467 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 ARPC3P2-201ENST00000457786 533 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC017015.1-201ENST00000477387 286 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 AF213884.1-201ENST00000488102 463 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 CAB39P1-201ENST00000502277 460 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 MTCO1P35-201ENST00000515270 228 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 RNU6-1095P-201ENST00000516148 108 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 MIR2116-201ENST00000517221 80 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC079171.1-201ENST00000568788 914 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AL109653.1-201ENST00000603091 248 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 SNORA50A-202ENST00000629536 136 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 AC244205.2-202ENST00000635781 342 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VMP1Q96GC9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 RPS4XP5-202ENST00000449995 1334 ntBASIC3.9□□□□□ -1.79
VMP1Q96GC9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
VMP1Q96GC9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
VMP1Q96GC9 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC110774.1-201ENST00000623567 2018 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
VMP1Q96GC9 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 MTCO1P56-201ENST00000401674 224 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 RN7SKP33-201ENST00000410942 340 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 LUZP4P1-201ENST00000415420 344 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 C1DP1-201ENST00000426049 402 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 RPL17P49-201ENST00000443728 411 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 RPS7P7-201ENST00000463499 571 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC103987.1-201ENST00000473394 348 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 RNU6-1261P-201ENST00000517194 104 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 LARP7P2-201ENST00000575306 125 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.89□□□□□ -1.79
VMP1Q96GC9 AL591034.3-201ENST00000605511 685 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC092574.1-201ENST00000609771 420 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AC010608.2-201ENST00000624830 470 ntBASIC3.89□□□□□ -1.79
VMP1Q96GC9 AL079305.1-201ENST00000623159 3008 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 OR11H4-201ENST00000315409 1082 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VMP1Q96GC9 OR5H2-201ENST00000355273 945 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 Y_RNA.25-201ENST00000362528 102 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 MIR506-201ENST00000384998 124 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 Y_RNA.578-201ENST00000390903 88 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.88□□□□□ -1.79
VMP1Q96GC9 MTND4P3-201ENST00000417829 541 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 GLRXP1-201ENST00000423261 334 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 PSMA6P3-201ENST00000428242 164 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VMP1Q96GC9 AC079776.3-201ENST00000450665 370 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 PNPLA4P1-201ENST00000458328 305 ntBASIC3.88□□□□□ -1.79
VMP1Q96GC9 RN7SL93P-201ENST00000463035 293 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms