Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 PABPC1P3-201ENST00000469174 459 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AC114786.4-201ENST00000508771 728 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AC009646.1-201ENST00000510455 318 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 RN7SKP82-201ENST00000516786 223 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.37□□□□□ -1.55
DDX1Q92499 AC012339.2-201ENST00000523996 453 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.37□□□□□ -1.55
DDX1Q92499 ATP5J2P6-201ENST00000565203 266 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 MIR4270-201ENST00000581799 70 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 MIR544B-201ENST00000582372 78 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 RNF138P2-201ENST00000603490 592 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AL009028.1-201ENST00000604895 802 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX1Q92499 AL627230.1-201ENST00000613077 211 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AL591926.8-201ENST00000616876 211 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 MIR6863-201ENST00000636112 90 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
DDX1Q92499 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AC104623.2-202ENST00000623477 4002 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AL022578.1-201ENST00000439330 1433 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 AC097504.1-201ENST00000515103 2415 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 SAMMSON-213ENST00000641336 1521 ntBASIC5.37□□□□□ -1.55
DDX1Q92499 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX1Q92499 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.37□□□□□ -1.55
DDX1Q92499 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
DDX1Q92499 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX1Q92499 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 FRG1BP-201ENST00000278882 761 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 FRG1CP-201ENST00000358464 769 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 Y_RNA.529-201ENST00000384586 119 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AL078599.1-201ENST00000402075 293 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 BTBD10P2-201ENST00000404779 676 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 MIR1302-11-201ENST00000408051 138 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 MIR1302-9-201ENST00000408365 138 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 MIR1302-10-201ENST00000408734 138 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AIMP1P1-201ENST00000418670 937 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC069157.1-201ENST00000421749 137 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.36□□□□□ -1.55
DDX1Q92499 SKP1P1-201ENST00000438081 489 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC093019.1-201ENST00000443135 252 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 HSPE1P28-201ENST00000443139 211 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 IGHV5-78-201ENST00000450948 295 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC104073.1-201ENST00000451988 151 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 RPS20P21-201ENST00000466859 343 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 RPL31P50-201ENST00000471002 296 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.36□□□□□ -1.55
DDX1Q92499 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 SLC25A15P5-201ENST00000508033 253 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC111000.3-201ENST00000508057 576 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 AP002748.2-201ENST00000528671 348 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 LSM3P2-201ENST00000551246 273 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 RPS3AP23-202ENST00000574601 686 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC105254.2-201ENST00000603636 436 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 MIR1302-2-201ENST00000607096 138 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 AL139089.1-201ENST00000620372 975 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 AC000123.2-201ENST00000623124 461 ntBASIC5.36□□□□□ -1.55
DDX1Q92499 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.36□□□□□ -1.55
DDX1Q92499 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
DDX1Q92499 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX1Q92499 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX1Q92499 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
DDX1Q92499 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DDX1Q92499 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.35□□□□□ -1.55
DDX1Q92499 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
DDX1Q92499 SNURFL-201ENST00000309296 343 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 Y_RNA.97-201ENST00000363094 102 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 RNU6-777P-201ENST00000364265 104 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.35□□□□□ -1.55
DDX1Q92499 Y_RNA.573-201ENST00000384763 105 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.35□□□□□ -1.55
DDX1Q92499 Y_RNA.598-201ENST00000410480 95 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 AC119751.6-201ENST00000416712 186 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 RPS15AP40-201ENST00000419621 391 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 AL358176.3-201ENST00000420757 454 ntBASIC5.35□□□□□ -1.55
DDX1Q92499 MTCO2P5-201ENST00000422621 426 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms