Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MTCO3P35-201ENST00000485582 781 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AF186190.1-201ENST00000517470 480 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC091163.3-201ENST00000518269 1144 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SNED1Q8TER0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL008729.2-201ENST00000606393 473 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC004775.1-201ENST00000607389 753 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL096803.3-201ENST00000609032 532 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC008121.2-201ENST00000614647 523 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC025016.1-201ENST00000616746 682 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNED1Q8TER0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 MTND4P5-201ENST00000435821 1374 ntBASIC4.14□□□□□ -1.75
SNED1Q8TER0 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SNED1Q8TER0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 RNU4-28P-201ENST00000364739 141 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 RNU6-532P-201ENST00000384318 107 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 MIR320B1-201ENST00000390209 79 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC004552.1-201ENST00000419089 348 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 USP9YP24-201ENST00000434374 697 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 THAP5P1-201ENST00000439089 262 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 USP9YP17-201ENST00000444617 696 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SNED1Q8TER0 HMGB1P26-201ENST00000452520 628 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 RPS6P2-201ENST00000454208 705 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 RPS26P3-201ENST00000470205 348 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC090543.2-201ENST00000483963 348 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC004057.1-201ENST00000485827 348 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 HMGB1P38-201ENST00000490557 577 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC010486.2-201ENST00000505572 483 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC021146.7-201ENST00000509604 775 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AL117351.2-201ENST00000513571 157 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 OR5AP1P-201ENST00000529730 940 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC005242.1-201ENST00000585658 438 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC119751.7-201ENST00000600494 245 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC021171.1-201ENST00000603137 706 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC233280.2-201ENST00000603917 1070 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AL139344.1-201ENST00000605228 195 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC093732.2-201ENST00000607950 274 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC011939.3-201ENST00000613686 466 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AC073073.2-201ENST00000609827 2578 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNED1Q8TER0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNED1Q8TER0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SNED1Q8TER0 AL592437.2-201ENST00000421655 2434 ntBASIC4.13□□□□□ -1.75
SNED1Q8TER0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SNED1Q8TER0 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 RPL22P18-201ENST00000417197 377 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 USP9YP21-201ENST00000420603 432 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC007563.3-201ENST00000433233 371 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 MTCO3P5-201ENST00000433620 714 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 CR769776.1-201ENST00000441254 787 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 RNU7-27P-201ENST00000459281 62 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 BET1P1-201ENST00000482276 359 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC112198.1-201ENST00000505369 1220 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 MTND4P2-201ENST00000507767 1203 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 AC067904.2-201ENST00000517322 1283 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AP001207.2-201ENST00000519490 539 ntBASIC4.12□□□□□ -1.75
SNED1Q8TER0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.12□□□□□ -1.75
SNED1Q8TER0 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms