Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AC007993.1-201ENST00000621298 2430 ntBASIC6.98□□□□□ -1.29
VARS2Q5ST30 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.98□□□□□ -1.29
VARS2Q5ST30 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VARS2Q5ST30 AL445437.1-201ENST00000623157 3087 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC023245.2-201ENST00000530760 2978 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 RNU6-937P-201ENST00000384325 106 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 RPS29P14-201ENST00000431518 171 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AL159987.2-201ENST00000432754 307 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC007679.3-201ENST00000434035 414 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 GAPDHP59-201ENST00000435908 267 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 PPIAP10-201ENST00000438675 458 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 RPL21P103-201ENST00000479921 488 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC115990.1-201ENST00000526957 301 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 MIR548X2-201ENST00000579776 100 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 SNHG22-203ENST00000617833 660 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AL596245.1-201ENST00000618994 362 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 AL512652.1-201ENST00000619006 500 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.97□□□□□ -1.29
VARS2Q5ST30 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VARS2Q5ST30 TMCC1P1-201ENST00000518897 1980 ntBASIC6.97□□□□□ -1.29
VARS2Q5ST30 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VARS2Q5ST30 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
VARS2Q5ST30 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.96□□□□□ -1.29
VARS2Q5ST30 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
VARS2Q5ST30 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
VARS2Q5ST30 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VARS2Q5ST30 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
VARS2Q5ST30 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.96□□□□□ -1.29
VARS2Q5ST30 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
VARS2Q5ST30 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
VARS2Q5ST30 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 COX6B1P3-201ENST00000312310 260 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 SNORA51.1-201ENST00000363243 140 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 MIR539-201ENST00000365690 78 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 RNU6-1064P-201ENST00000410626 104 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 RN7SKP206-201ENST00000410823 293 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC099782.1-201ENST00000425889 474 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 AL591043.1-201ENST00000432461 424 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AL357134.1-201ENST00000445848 426 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 RPL23AP15-201ENST00000450202 459 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC091180.1-201ENST00000462104 372 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 RNA5SP441-201ENST00000516809 88 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 TGIF1P1-201ENST00000558095 802 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 CPDP1-201ENST00000579660 283 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 MIR4502-201ENST00000580432 81 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 AL450226.2-201ENST00000622913 439 ntBASIC6.96□□□□□ -1.3
VARS2Q5ST30 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.96□□□□□ -1.3
VARS2Q5ST30 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VARS2Q5ST30 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms