Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 PRELID3BP10-201ENST00000431957 584 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 MTND5P14-201ENST00000441481 1267 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 RPL23AP43-201ENST00000446445 471 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 RPS27AP17-201ENST00000463344 455 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 RPF2P2-201ENST00000504693 896 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 LTV1P1-201ENST00000510683 1237 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 RNU6-27P-201ENST00000516146 107 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 Vault.1-201ENST00000516474 102 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 MIR2114-201ENST00000516645 80 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 RNU6-232P-201ENST00000517144 64 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 EEF1B2P4-201ENST00000551398 348 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 AL360157.1-201ENST00000565962 87 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC136618.2-201ENST00000575091 400 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC004223.4-201ENST00000612426 332 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AL445264.1-201ENST00000621719 171 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC068057.2-201ENST00000624047 895 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC091925.2-201ENST00000625059 256 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 DHX40P1-201ENST00000588725 1412 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC38Q502W7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC38Q502W7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC38Q502W7 RNU6-723P-201ENST00000383973 107 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 SNORD51-201ENST00000384320 80 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 SNORD116-8-201ENST00000384365 95 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 RNA5SP397-201ENST00000391323 118 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 RN7SKP56-201ENST00000410513 331 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC007742.1-201ENST00000425789 329 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 MTND1P20-201ENST00000430341 950 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 EZH2P1-201ENST00000431167 291 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 ELOCP26-201ENST00000436067 329 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 UBE2FP3-201ENST00000436366 524 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 USP9YP7-201ENST00000436723 430 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 USP9YP32-201ENST00000452432 430 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AP001992.1-205ENST00000462248 379 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 BZW1P2-201ENST00000473537 826 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC008802.1-201ENST00000519121 791 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 COX6CP8-201ENST00000522620 226 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC024224.1-201ENST00000538284 609 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC090888.1-201ENST00000561335 1141 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC022079.1-201ENST00000621546 602 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 AC006065.6-201ENST00000625201 545 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 OR8B1P-202ENST00000641132 1178 ntBASIC4.51□□□□□ -1.69
CCDC38Q502W7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC38Q502W7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC38Q502W7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC38Q502W7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC38Q502W7 MAPK10-253ENST00000641010 4072 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC38Q502W7 RPS20P14-201ENST00000412545 360 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC38Q502W7 RPS23P10-201ENST00000416185 486 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AIMP1P1-201ENST00000418670 937 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC092647.1-201ENST00000420654 287 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 USP9YP26-201ENST00000421008 661 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC244098.2-201ENST00000422068 99 ntBASIC4.5□□□□□ -1.69
CCDC38Q502W7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.5□□□□□ -1.69
CCDC38Q502W7 AC092832.1-201ENST00000422934 400 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms