Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU2-6P-201ENST00000411404 190 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC069218.2-201ENST00000411665 344 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 Z99755.1-201ENST00000414048 380 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 MTND2P16-201ENST00000419987 799 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 MTCYBP24-201ENST00000420387 1106 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 ETF1P3-201ENST00000430422 1160 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 RPS26P30-201ENST00000443431 335 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 NF1P3-201ENST00000457709 450 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 RPL21P47-201ENST00000483696 477 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 GMPSP1-201ENST00000514075 579 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 C1DP5-201ENST00000525775 383 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC139103.1-201ENST00000534696 1030 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 DUXAP6-201ENST00000553858 601 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AL133457.1-201ENST00000564251 987 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC099489.2-201ENST00000574976 260 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 MIR3186-201ENST00000577404 85 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 RN7SL622P-201ENST00000585292 275 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AP005229.2-201ENST00000609980 697 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 AC253576.2-201ENST00000618815 580 ntBASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SHROOM1Q2M3G4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 SNORA48.5-201ENST00000391143 135 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 RSL24D1P1-201ENST00000404972 493 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 RNU2-71P-201ENST00000411395 189 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 USP12PY-201ENST00000427677 1064 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 FO393414.1-201ENST00000428697 1184 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AF228730.2-201ENST00000438784 848 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AL035407.2-201ENST00000454090 378 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AL136097.1-201ENST00000456945 913 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 RPS3AP50-201ENST00000487064 803 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC008565.1-201ENST00000509046 885 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC083923.1-201ENST00000523708 376 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 CR383656.14-201ENST00000551951 406 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 SERPINE4P-201ENST00000554978 281 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC012182.1-201ENST00000570133 895 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC120053.1-201ENST00000607706 736 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC092184.1-201ENST00000625042 715 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 U6.98-201ENST00000637157 84 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 AC068647.1-201ENST00000489539 2265 ntBASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SHROOM1Q2M3G4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SHROOM1Q2M3G4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 ENSAP3-201ENST00000312710 333 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 RNA5SP322-201ENST00000363617 119 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 HMGN1P24-201ENST00000412282 298 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 OR51AB1P-201ENST00000429046 620 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 Z77249.1-201ENST00000444622 1175 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 AC068135.1-201ENST00000446164 246 ntBASIC3.96□□□□□ -1.78
SHROOM1Q2M3G4 GXYLT1P1-201ENST00000446657 490 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms