Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC138907.8-201ENST00000623981 2256 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC066616.2-201ENST00000559334 1481 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDH1Q08174 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDH1Q08174 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDH1Q08174 Y_RNA.167-201ENST00000363735 109 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 RNU6-331P-201ENST00000384724 107 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 MIR130A-201ENST00000385274 89 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 MRPL53P1-201ENST00000414323 319 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 NPM1P18-201ENST00000434232 732 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AL359265.2-201ENST00000434367 631 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 RPL12P18-201ENST00000437175 325 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 HMGB3P22-202ENST00000451823 572 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 snoU13.7-201ENST00000459220 104 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 SIAH1P1-201ENST00000479411 923 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 Y_RNA.654-201ENST00000497848 106 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 PTP4A1P4-201ENST00000512479 322 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 Y_RNA.667-201ENST00000516212 107 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 RNU6-566P-201ENST00000516790 107 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AL138895.2-201ENST00000603019 178 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AP000654.2-201ENST00000605633 586 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AC133644.2-201ENST00000608142 540 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 AL122125.1-201ENST00000616999 600 ntBASIC5.54□□□□□ -1.52
PCDH1Q08174 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDH1Q08174 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH1Q08174 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
PCDH1Q08174 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PCDH1Q08174 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH1Q08174 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 NXPH1-205ENST00000602349 1953 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH1Q08174 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 MIR323B-201ENST00000385269 82 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RNU6-1106P-201ENST00000390845 107 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC092642.1-201ENST00000392417 425 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH1Q08174 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH1Q08174 SNRPEP4-201ENST00000435815 279 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 MRPS31P2-201ENST00000451581 518 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AL162395.1-201ENST00000457882 422 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RNU7-59P-201ENST00000459101 61 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RPL35AP28-201ENST00000459730 331 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RPS23P2-201ENST00000463671 415 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AL135752.1-201ENST00000479477 471 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RPL30P11-201ENST00000495304 339 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RPS17P5-201ENST00000498293 408 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC024558.1-201ENST00000505008 528 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC098591.2-201ENST00000510152 315 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH1Q08174 RN7SKP24-201ENST00000515888 284 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC021678.3-201ENST00000517893 476 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC060775.1-201ENST00000518241 520 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC005363.1-201ENST00000530779 351 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH1Q08174 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH1Q08174 AP000763.2-201ENST00000540641 163 ntBASIC5.53□□□□□ -1.52
PCDH1Q08174 AC137627.1-201ENST00000545761 289 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms