Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SCN1BQ07699 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
SCN1BQ07699 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SCN1BQ07699 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN1BQ07699 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.65□□□□□ -1.82
SCN1BQ07699 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN1BQ07699 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN1BQ07699 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SCN1BQ07699 AC099786.3-201ENST00000565735 1410 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 OR5H2-201ENST00000355273 945 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SCN1BQ07699 MIR331-201ENST00000362302 94 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 RNU6-1155P-201ENST00000363554 107 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 Y_RNA.465-201ENST00000384293 102 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 RNU2-47P-201ENST00000410649 186 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 YPEL5P1-201ENST00000419731 367 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL137014.1-201ENST00000420490 1226 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC007742.1-201ENST00000425789 329 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 NIPA2P1-201ENST00000426223 976 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN1BQ07699 BMS1P19-201ENST00000433925 393 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN1BQ07699 ELOCP26-201ENST00000436067 329 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 MUPP-201ENST00000438111 566 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL500522.2-201ENST00000448562 343 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN1BQ07699 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN1BQ07699 RPL23AP31-201ENST00000456160 467 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AP001992.1-205ENST00000462248 379 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 RPL7P38-201ENST00000488396 739 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN1BQ07699 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.65□□□□□ -1.83
SCN1BQ07699 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC022861.1-201ENST00000522981 663 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 HSPA8P13-201ENST00000523715 472 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC084824.1-201ENST00000550917 1005 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL109766.1-201ENST00000555080 552 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AL049838.1-201ENST00000563647 981 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC053481.3-201ENST00000577881 843 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 OR4K7P-201ENST00000580232 945 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 RN7SL690P-201ENST00000582087 240 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC069366.1-201ENST00000583159 838 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC079587.1-201ENST00000603846 277 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL163642.2-201ENST00000604722 1019 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AL355810.1-201ENST00000614629 552 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AL021997.2-201ENST00000615674 271 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 MIR6891-201ENST00000618788 93 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC022960.3-201ENST00000619794 441 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.65□□□□□ -1.83
SCN1BQ07699 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SCN1BQ07699 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.65□□□□□ -1.83
SCN1BQ07699 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.65□□□□□ -1.83
SCN1BQ07699 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SCN1BQ07699 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SCN1BQ07699 MTND5P24-201ENST00000438892 1767 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 OR4G11P-202ENST00000642116 1414 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 AC097714.1-201ENST00000511272 1647 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.64□□□□□ -1.83
SCN1BQ07699 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 RNU6-636P-201ENST00000384598 107 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.64□□□□□ -1.83
SCN1BQ07699 TIMM9P2-201ENST00000419324 266 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 OR1AA1P-201ENST00000419597 916 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 RPEP3-201ENST00000425462 676 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.64□□□□□ -1.83
SCN1BQ07699 ATP5F1P1-201ENST00000433775 569 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 AL359265.2-201ENST00000434367 631 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 MTND4P6-201ENST00000438297 472 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 HSPE1P28-201ENST00000443139 211 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 RPL26P28-201ENST00000451325 435 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 MTCO3P11-201ENST00000455103 774 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 U3.44-201ENST00000458938 192 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
SCN1BQ07699 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.64□□□□□ -1.83
SCN1BQ07699 AP000827.1-201ENST00000527814 258 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCN1BQ07699 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.64□□□□□ -1.83
SCN1BQ07699 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.64□□□□□ -1.83
SCN1BQ07699 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SCN1BQ07699 AL132857.1-201ENST00000555180 708 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.64□□□□□ -1.83
SCN1BQ07699 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
SCN1BQ07699 AC245884.10-201ENST00000597355 337 ntBASIC3.64□□□□□ -1.83
SCN1BQ07699 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms