Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX4Q06945 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.65□□□□□ -1.5
SOX4Q06945 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX4Q06945 RPL12P3-201ENST00000440080 396 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX4Q06945 NOP56P2-201ENST00000447491 769 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX4Q06945 DHFRP3-201ENST00000455595 559 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.65□□□□□ -1.5
SOX4Q06945 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX4Q06945 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.65□□□□□ -1.5
SOX4Q06945 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX4Q06945 AC063950.1-201ENST00000552036 308 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.65□□□□□ -1.5
SOX4Q06945 NCAPGP2-201ENST00000557911 754 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SOX4Q06945 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX4Q06945 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.65□□□□□ -1.5
SOX4Q06945 AP001029.3-201ENST00000588063 596 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AC008814.1-201ENST00000603797 406 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 CYP2C61P-201ENST00000604072 290 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AL162431.4-201ENST00000604674 411 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 MIR6133-201ENST00000617057 108 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 uc_338.22-201ENST00000622722 187 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AC099494.2-201ENST00000623371 978 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 AC140134.1-201ENST00000511830 3544 ntBASIC5.65□□□□□ -1.5
SOX4Q06945 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
SOX4Q06945 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SOX4Q06945 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.65□□□□□ -1.51
SOX4Q06945 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SOX4Q06945 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.65□□□□□ -1.51
SOX4Q06945 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SOX4Q06945 AL360270.2-201ENST00000562952 5985 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SOX4Q06945 RNA5SP305-201ENST00000362665 119 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 Y_RNA.373-201ENST00000365600 103 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 RNU4-20P-201ENST00000365601 151 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 Y_RNA.452-201ENST00000384202 108 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 MIR600-201ENST00000385007 98 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 RPL7P60-201ENST00000397636 735 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 MTCYBP4-201ENST00000401524 249 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AL109941.1-201ENST00000401925 229 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AL592114.1-201ENST00000403842 483 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AC234781.4-201ENST00000419384 244 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 REREP1Y-201ENST00000422655 198 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX4Q06945 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX4Q06945 SNRPEP4-201ENST00000435815 279 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 REREP2Y-201ENST00000439103 200 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX4Q06945 AC091685.2-201ENST00000454924 864 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AC079168.1-201ENST00000458741 345 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AC108161.1-201ENST00000461060 402 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 FAM206BP-201ENST00000510179 541 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 EIF3KP3-201ENST00000514461 639 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 Y_RNA.665-201ENST00000516177 98 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 RNU6-988P-201ENST00000519081 107 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 SUMO2P20-201ENST00000520803 283 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.64□□□□□ -1.51
SOX4Q06945 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX4Q06945 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX4Q06945 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.64□□□□□ -1.51
SOX4Q06945 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX4Q06945 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
SOX4Q06945 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SOX4Q06945 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX4Q06945 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
SOX4Q06945 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.64□□□□□ -1.51
SOX4Q06945 VPS35P1-201ENST00000563400 1518 ntBASIC5.64□□□□□ -1.51
SOX4Q06945 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
SOX4Q06945 AC016745.2-201ENST00000608834 3443 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX4Q06945 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
SOX4Q06945 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SOX4Q06945 SNURFL-201ENST00000309296 343 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 Y_RNA.28-201ENST00000362554 111 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 RNU1-85P-201ENST00000364127 164 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 RNA5SP90-201ENST00000364801 99 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX4Q06945 CISD1P1-201ENST00000393907 327 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 MIR937-201ENST00000401271 86 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.63□□□□□ -1.51
SOX4Q06945 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 MIR1182-201ENST00000408363 97 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 RNU6-1304P-201ENST00000411374 106 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 AC005517.2-201ENST00000424673 553 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 AL590762.4-201ENST00000425885 253 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 AC138761.5-201ENST00000433967 325 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 AL138799.3-201ENST00000438968 350 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX4Q06945 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX4Q06945 RPL32P28-201ENST00000443577 397 ntBASIC5.63□□□□□ -1.51
SOX4Q06945 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX4Q06945 RPL21P99-201ENST00000480369 423 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms