Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC061975.8-201ENST00000587058 721 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC012493.2-201ENST00000595083 291 ntBASIC1.73□□□□□ -2.13
RPL39P62891 AC034229.5-201ENST00000624258 185 ntBASIC1.73□□□□□ -2.13
RPL39P62891 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPL39P62891 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPL39P62891 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPL39P62891 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPL39P62891 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.73□□□□□ -2.13
RPL39P62891 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RPL39P62891 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL39P62891 OR5H2-201ENST00000355273 945 ntBASIC1.72□□□□□ -2.13
RPL39P62891 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL39P62891 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
RPL39P62891 MIR7-3-201ENST00000384898 110 ntBASIC1.72□□□□□ -2.13
RPL39P62891 ATP5F1P3-201ENST00000397213 657 ntBASIC1.72□□□□□ -2.13
RPL39P62891 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL39P62891 RPS3AP25-201ENST00000411660 793 ntBASIC1.72□□□□□ -2.13
RPL39P62891 RAP1BP1-201ENST00000412709 553 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AL158825.1-201ENST00000414735 521 ntBASIC1.72□□□□□ -2.13
RPL39P62891 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.72□□□□□ -2.13
RPL39P62891 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 YME1L1P1-201ENST00000429435 297 ntBASIC1.72□□□□□ -2.13
RPL39P62891 RPS24P8-201ENST00000431490 402 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL39P62891 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 AL135938.1-201ENST00000443141 297 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AC009961.3-201ENST00000449832 765 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AC140076.1-201ENST00000449897 361 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 AC092754.2-201ENST00000463506 460 ntBASIC1.72□□□□□ -2.13
RPL39P62891 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL39P62891 AC078918.1-201ENST00000498515 228 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.72□□□□□ -2.13
RPL39P62891 AP003467.2-201ENST00000520175 319 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC1.72□□□□□ -2.13
RPL39P62891 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC1.72□□□□□ -2.13
RPL39P62891 AC138761.3-201ENST00000579993 334 ntBASIC1.72□□□□□ -2.13
RPL39P62891 RPL23AP92-201ENST00000603609 255 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AL109618.2-201ENST00000605527 211 ntBASIC1.72□□□□□ -2.13
RPL39P62891 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC1.72□□□□□ -2.13
RPL39P62891 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPL39P62891 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL39P62891 AC087565.3-202ENST00000642085 1603 ntBASIC1.72□□□□□ -2.13
RPL39P62891 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPL39P62891 HSPA8P17-201ENST00000427029 1382 ntBASIC1.72□□□□□ -2.13
RPL39P62891 AL512283.1-201ENST00000606756 1384 ntBASIC1.72□□□□□ -2.13
RPL39P62891 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL39P62891 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL39P62891 PHKBP1-201ENST00000450951 1951 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RPL39P62891 RNA5SP456-201ENST00000364002 114 ntBASIC1.71□□□□□ -2.14
RPL39P62891 RNU1-140P-201ENST00000365040 165 ntBASIC1.71□□□□□ -2.14
RPL39P62891 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPL39P62891 SNORA41-201ENST00000384675 132 ntBASIC1.71□□□□□ -2.14
RPL39P62891 SNORA80E-201ENST00000384744 137 ntBASIC1.71□□□□□ -2.14
RPL39P62891 U3.37-201ENST00000408528 213 ntBASIC1.71□□□□□ -2.14
RPL39P62891 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL39P62891 RPL19P1-201ENST00000411635 428 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AL024507.1-201ENST00000412741 274 ntBASIC1.71□□□□□ -2.14
RPL39P62891 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPL39P62891 AL031736.2-201ENST00000426573 787 ntBASIC1.71□□□□□ -2.14
RPL39P62891 RPS24P13-201ENST00000442520 397 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL39P62891 SNORA84-201ENST00000459229 133 ntBASIC1.71□□□□□ -2.14
RPL39P62891 VN1R17P-201ENST00000472048 1090 ntBASIC1.71□□□□□ -2.14
RPL39P62891 HMGB1P3-201ENST00000502802 616 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.71□□□□□ -2.14
RPL39P62891 SEC11B-201ENST00000518383 499 ntBASIC1.71□□□□□ -2.14
RPL39P62891 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.71□□□□□ -2.14
RPL39P62891 OR4R2P-201ENST00000530815 597 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AC078814.3-201ENST00000553036 491 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.71□□□□□ -2.14
RPL39P62891 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 AC079880.2-201ENST00000603790 1213 ntBASIC1.71□□□□□ -2.14
RPL39P62891 RPL23AP88-201ENST00000605759 454 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AC004696.1-201ENST00000614345 607 ntBASIC1.71□□□□□ -2.14
RPL39P62891 AC084757.4-201ENST00000616350 526 ntBASIC1.71□□□□□ -2.14
RPL39P62891 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.71□□□□□ -2.14
RPL39P62891 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.71□□□□□ -2.14
RPL39P62891 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPL39P62891 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPL39P62891 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPL39P62891 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.7□□□□□ -2.14
RPL39P62891 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPL39P62891 MIR9-1-201ENST00000385198 89 ntBASIC1.7□□□□□ -2.14
RPL39P62891 RPL21P75-201ENST00000396599 483 ntBASIC1.7□□□□□ -2.14
RPL39P62891 RPL21P28-201ENST00000401418 483 ntBASIC1.7□□□□□ -2.14
RPL39P62891 AL592114.1-201ENST00000403842 483 ntBASIC1.7□□□□□ -2.14
RPL39P62891 DHFRP5-201ENST00000406944 564 ntBASIC1.7□□□□□ -2.14
RPL39P62891 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.7□□□□□ -2.14
RPL39P62891 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.7□□□□□ -2.14
RPL39P62891 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms