Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
AP3S2P59780 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
AP3S2P59780 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.71□□□□□ -1.98
AP3S2P59780 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
AP3S2P59780 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.71□□□□□ -1.98
AP3S2P59780 SNORA70C-201ENST00000384538 135 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 MT-TC-201ENST00000387405 66 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AL356806.1-201ENST00000422524 916 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 AL513175.1-201ENST00000431492 780 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 AL513321.1-201ENST00000441175 761 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 RPL21P89-201ENST00000444021 467 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 RPS26P56-201ENST00000444468 240 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 RPL23AP20-201ENST00000447965 421 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.71□□□□□ -1.98
AP3S2P59780 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.71□□□□□ -1.98
AP3S2P59780 CYCSP35-201ENST00000451978 304 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 RPS27AP9-201ENST00000477681 438 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 SUMO1P1-201ENST00000497904 306 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 RNF138P1-201ENST00000502765 546 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
AP3S2P59780 AC098799.2-201ENST00000509466 868 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.71□□□□□ -1.98
AP3S2P59780 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.71□□□□□ -1.98
AP3S2P59780 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.71□□□□□ -1.98
AP3S2P59780 AC005476.1-201ENST00000554427 397 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AL669831.4-202ENST00000590817 238 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.71□□□□□ -1.98
AP3S2P59780 AC019159.1-201ENST00000605094 187 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AL133507.1-201ENST00000605269 557 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 RPL23AP88-201ENST00000605759 454 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AL627309.6-201ENST00000606857 840 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC090912.3-201ENST00000609775 533 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC083809.1-201ENST00000615051 472 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 AC008083.4-201ENST00000615076 444 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.71□□□□□ -1.98
AP3S2P59780 AC127502.3-201ENST00000636170 1206 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
AP3S2P59780 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
AP3S2P59780 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.71□□□□□ -1.98
AP3S2P59780 AC009487.2-201ENST00000420969 6821 ntBASIC2.71□□□□□ -1.98
AP3S2P59780 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP3S2P59780 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
AP3S2P59780 ZNF734P-201ENST00000419494 1534 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 RNA5SP51-201ENST00000364750 119 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 FO393413.1-201ENST00000402892 195 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 RNA5SP56-201ENST00000410277 118 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.7□□□□□ -1.98
AP3S2P59780 OR1AA1P-201ENST00000419597 916 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AL117339.2-201ENST00000430475 180 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 PTP4A1P3-201ENST00000433661 420 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC073143.1-201ENST00000436316 395 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
AP3S2P59780 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 RN7SL132P-201ENST00000478131 296 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.7□□□□□ -1.98
AP3S2P59780 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP3S2P59780 AC009901.1-201ENST00000506703 541 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 RNU6-491P-201ENST00000516099 110 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.7□□□□□ -1.98
AP3S2P59780 CR383656.14-201ENST00000551951 406 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 NBEAP1-201ENST00000554452 979 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 PARP1P2-201ENST00000556806 195 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC006504.3-201ENST00000586818 523 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.7□□□□□ -1.98
AP3S2P59780 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.7□□□□□ -1.98
AP3S2P59780 MIR6076-201ENST00000617521 113 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 MIR6729-201ENST00000618194 65 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 AC002064.3-201ENST00000623448 346 ntBASIC2.7□□□□□ -1.98
AP3S2P59780 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
AP3S2P59780 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
AP3S2P59780 AC138915.1-201ENST00000565427 1685 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
AP3S2P59780 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.69□□□□□ -1.98
AP3S2P59780 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
AP3S2P59780 OR52E6-202ENST00000379946 954 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 Y_RNA.493-201ENST00000384422 102 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 CYB5AP4-201ENST00000396692 399 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 RNA5SP317-201ENST00000410176 116 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 RNU4-78P-201ENST00000410940 126 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 RNA5SP311-201ENST00000411290 116 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 AC010385.1-201ENST00000412374 256 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.69□□□□□ -1.98
AP3S2P59780 TCEA1P4-201ENST00000415066 844 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.69□□□□□ -1.98
AP3S2P59780 OFD1P18Y-201ENST00000420889 959 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 HMGN2P30-201ENST00000423237 256 ntBASIC2.69□□□□□ -1.98
AP3S2P59780 CYCSP4-201ENST00000429682 331 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms