Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VSX2P58304 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
VSX2P58304 MTND5P11-201ENST00000511037 1812 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AL672296.1-201ENST00000427780 2158 ntBASIC3.17□□□□□ -1.9
VSX2P58304 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VSX2P58304 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
VSX2P58304 SNORA31-201ENST00000362607 130 ntBASIC3.17□□□□□ -1.9
VSX2P58304 RNU6-525P-201ENST00000363685 104 ntBASIC3.17□□□□□ -1.9
VSX2P58304 OR52E6-202ENST00000379946 954 ntBASIC3.17□□□□□ -1.9
VSX2P58304 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 TAF9BP1-201ENST00000396646 746 ntBASIC3.17□□□□□ -1.9
VSX2P58304 PRRC2CP1-201ENST00000404428 159 ntBASIC3.17□□□□□ -1.9
VSX2P58304 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 RPL23AP82-202ENST00000427528 469 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC004865.1-201ENST00000442276 1003 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AL591503.2-201ENST00000442314 1005 ntBASIC3.17□□□□□ -1.9
VSX2P58304 BX510359.1-201ENST00000456973 237 ntBASIC3.17□□□□□ -1.9
VSX2P58304 CENPBD1P1-201ENST00000464061 469 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
VSX2P58304 RPL21P103-201ENST00000479921 488 ntBASIC3.17□□□□□ -1.9
VSX2P58304 RPL21P13-201ENST00000488305 481 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC078918.1-201ENST00000498515 228 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC020893.1-201ENST00000502452 580 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC026427.2-201ENST00000506228 536 ntBASIC3.17□□□□□ -1.9
VSX2P58304 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 AC005921.1-201ENST00000510589 286 ntBASIC3.17□□□□□ -1.9
VSX2P58304 PHBP14-201ENST00000512887 367 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 AL442163.2-201ENST00000553912 710 ntBASIC3.17□□□□□ -1.9
VSX2P58304 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.17□□□□□ -1.9
VSX2P58304 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.17□□□□□ -1.9
VSX2P58304 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.17□□□□□ -1.9
VSX2P58304 RNA5SP108-201ENST00000605921 117 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC105429.2-201ENST00000610567 517 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.17□□□□□ -1.9
VSX2P58304 AC005156.1-201ENST00000613371 573 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AC110801.1-201ENST00000623590 212 ntBASIC3.17□□□□□ -1.9
VSX2P58304 AL590396.2-201ENST00000636511 1041 ntBASIC3.17□□□□□ -1.9
VSX2P58304 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.17□□□□□ -1.9
VSX2P58304 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
VSX2P58304 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VSX2P58304 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VSX2P58304 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.17□□□□□ -1.9
VSX2P58304 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.16□□□□□ -1.9
VSX2P58304 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VSX2P58304 AC118273.1-201ENST00000525324 3006 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AL512646.1-201ENST00000269395 1077 ntBASIC3.16□□□□□ -1.9
VSX2P58304 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VSX2P58304 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VSX2P58304 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VSX2P58304 MIR591-201ENST00000385290 95 ntBASIC3.16□□□□□ -1.9
VSX2P58304 U3.19-201ENST00000390893 196 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC092745.2-202ENST00000411880 369 ntBASIC3.16□□□□□ -1.9
VSX2P58304 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC063979.1-201ENST00000415539 377 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.16□□□□□ -1.9
VSX2P58304 AC008280.1-201ENST00000418851 412 ntBASIC3.16□□□□□ -1.9
VSX2P58304 RPS15AP40-201ENST00000419621 391 ntBASIC3.16□□□□□ -1.9
VSX2P58304 VN1R42P-201ENST00000424651 344 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC008065.1-201ENST00000428525 348 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.16□□□□□ -1.9
VSX2P58304 NEK4P1-201ENST00000433383 879 ntBASIC3.16□□□□□ -1.9
VSX2P58304 UBE2V1P5-201ENST00000440070 405 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.16□□□□□ -1.9
VSX2P58304 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.16□□□□□ -1.9
VSX2P58304 DNAJC19P8-201ENST00000452887 259 ntBASIC3.16□□□□□ -1.9
VSX2P58304 BTF3P5-201ENST00000457252 467 ntBASIC3.16□□□□□ -1.9
VSX2P58304 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC092754.2-201ENST00000463506 460 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC087312.1-201ENST00000471411 480 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 RPL23AP44-201ENST00000482216 473 ntBASIC3.16□□□□□ -1.9
VSX2P58304 DSTNP2-201ENST00000504533 515 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC010468.3-201ENST00000508225 458 ntBASIC3.16□□□□□ -1.9
VSX2P58304 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 SNORA74D-201ENST00000516404 141 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.16□□□□□ -1.9
VSX2P58304 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 AC006518.1-201ENST00000541449 943 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.16□□□□□ -1.9
VSX2P58304 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.16□□□□□ -1.9
VSX2P58304 AC027104.1-201ENST00000563702 681 ntBASIC3.16□□□□□ -1.9
VSX2P58304 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.16□□□□□ -1.9
VSX2P58304 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.16□□□□□ -1.9
VSX2P58304 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.16□□□□□ -1.9
VSX2P58304 AC008687.2-201ENST00000597865 520 ntBASIC3.16□□□□□ -1.9
VSX2P58304 ZNF92P2-201ENST00000600543 1059 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms