Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CMC4P56277 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 AL356274.2-201ENST00000624379 3752 ntBASIC2.58□□□□□ -2
CMC4P56277 RNA5SP72-201ENST00000364442 117 ntBASIC2.58□□□□□ -2
CMC4P56277 RNU6-283P-201ENST00000364788 107 ntBASIC2.58□□□□□ -2
CMC4P56277 ATP5F1P3-201ENST00000397213 657 ntBASIC2.58□□□□□ -2
CMC4P56277 RPL31P1-201ENST00000398116 372 ntBASIC2.58□□□□□ -2
CMC4P56277 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 AL121972.1-201ENST00000402023 252 ntBASIC2.58□□□□□ -2
CMC4P56277 RNU2-72P-201ENST00000411175 163 ntBASIC2.58□□□□□ -2
CMC4P56277 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AC246680.2-201ENST00000422106 389 ntBASIC2.58□□□□□ -2
CMC4P56277 ELOCP13-201ENST00000443934 329 ntBASIC2.58□□□□□ -2
CMC4P56277 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.58□□□□□ -2
CMC4P56277 GXYLT1P1-201ENST00000446657 490 ntBASIC2.58□□□□□ -2
CMC4P56277 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.58□□□□□ -2
CMC4P56277 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 AC097262.1-201ENST00000452559 548 ntBASIC2.58□□□□□ -2
CMC4P56277 NF1P3-201ENST00000457709 450 ntBASIC2.58□□□□□ -2
CMC4P56277 NAP1L1P3-201ENST00000462291 880 ntBASIC2.58□□□□□ -2
CMC4P56277 AP000563.1-201ENST00000490865 758 ntBASIC2.58□□□□□ -2
CMC4P56277 AC020893.1-201ENST00000502452 580 ntBASIC2.58□□□□□ -2
CMC4P56277 TRAV31-201ENST00000502780 342 ntBASIC2.58□□□□□ -2
CMC4P56277 OR5H5P-201ENST00000503164 928 ntBASIC2.58□□□□□ -2
CMC4P56277 HMGB1P22-201ENST00000505315 124 ntBASIC2.58□□□□□ -2
CMC4P56277 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 RN7SKP13-201ENST00000515933 244 ntBASIC2.58□□□□□ -2
CMC4P56277 MIR2114-201ENST00000516645 80 ntBASIC2.58□□□□□ -2
CMC4P56277 RN7SKP60-201ENST00000516985 239 ntBASIC2.58□□□□□ -2
CMC4P56277 IGKV2D-36-201ENST00000518643 226 ntBASIC2.58□□□□□ -2
CMC4P56277 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.58□□□□□ -2
CMC4P56277 IGLVIV-53-201ENST00000520107 367 ntBASIC2.58□□□□□ -2
CMC4P56277 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.58□□□□□ -2
CMC4P56277 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 MTCYBP41-201ENST00000528913 1123 ntBASIC2.58□□□□□ -2
CMC4P56277 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AL139174.1-201ENST00000531489 886 ntBASIC2.58□□□□□ -2
CMC4P56277 AP003385.6-201ENST00000531603 374 ntBASIC2.58□□□□□ -2
CMC4P56277 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AL121576.1-201ENST00000556055 276 ntBASIC2.58□□□□□ -2
CMC4P56277 AGGF1P8-201ENST00000562979 1000 ntBASIC2.58□□□□□ -2
CMC4P56277 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AC107954.1-201ENST00000565906 727 ntBASIC2.58□□□□□ -2
CMC4P56277 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AC012182.1-201ENST00000570133 895 ntBASIC2.58□□□□□ -2
CMC4P56277 AC015917.1-201ENST00000579654 510 ntBASIC2.58□□□□□ -2
CMC4P56277 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 MIR3690-201ENST00000580266 75 ntBASIC2.58□□□□□ -2
CMC4P56277 RN7SL339P-201ENST00000580597 296 ntBASIC2.58□□□□□ -2
CMC4P56277 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CMC4P56277 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.58□□□□□ -2
CMC4P56277 AC005776.1-201ENST00000603164 290 ntBASIC2.58□□□□□ -2
CMC4P56277 AC113368.1-201ENST00000603736 382 ntBASIC2.58□□□□□ -2
CMC4P56277 AC090425.2-201ENST00000608818 501 ntBASIC2.58□□□□□ -2
CMC4P56277 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
CMC4P56277 AC048347.1-201ENST00000624621 427 ntBASIC2.58□□□□□ -2
CMC4P56277 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.58□□□□□ -2
CMC4P56277 AL121594.5-201ENST00000631724 573 ntBASIC2.58□□□□□ -2
CMC4P56277 AL590396.4-201ENST00000636779 956 ntBASIC2.58□□□□□ -2
CMC4P56277 AL392088.2-201ENST00000637607 285 ntBASIC2.58□□□□□ -2
CMC4P56277 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.58□□□□□ -2
CMC4P56277 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 Z83843.1-201ENST00000604070 3685 ntBASIC2.58□□□□□ -2
CMC4P56277 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.58□□□□□ -2
CMC4P56277 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CMC4P56277 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CMC4P56277 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CMC4P56277 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC2.57□□□□□ -2
CMC4P56277 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CMC4P56277 AC000367.1-201ENST00000452711 1766 ntBASIC2.57□□□□□ -2
CMC4P56277 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CMC4P56277 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CMC4P56277 DBF4P1-201ENST00000412976 1892 ntBASIC2.57□□□□□ -2
CMC4P56277 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
CMC4P56277 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.57□□□□□ -2
CMC4P56277 RNA5SP119-201ENST00000362715 117 ntBASIC2.57□□□□□ -2
CMC4P56277 RNU6-353P-201ENST00000364266 108 ntBASIC2.57□□□□□ -2
CMC4P56277 SNORD6-201ENST00000365444 73 ntBASIC2.57□□□□□ -2
CMC4P56277 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.57□□□□□ -2
CMC4P56277 RNU6-468P-201ENST00000384003 109 ntBASIC2.57□□□□□ -2
CMC4P56277 RNU6-837P-201ENST00000391056 108 ntBASIC2.57□□□□□ -2
CMC4P56277 RPL22P22-201ENST00000395439 379 ntBASIC2.57□□□□□ -2
CMC4P56277 TMSB4XP8-201ENST00000402089 135 ntBASIC2.57□□□□□ -2
CMC4P56277 TMSB4XP6-201ENST00000415187 135 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms