Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 AL669831.4-202ENST00000590817 238 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC245036.5-201ENST00000596330 847 ntBASIC3.87□□□□□ -1.79
CDH13P55290 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 AL592221.1-201ENST00000605266 382 ntBASIC3.87□□□□□ -1.79
CDH13P55290 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH13P55290 MIR486-1-201ENST00000612171 68 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC243773.3-201ENST00000613270 256 ntBASIC3.87□□□□□ -1.79
CDH13P55290 AC010608.2-201ENST00000624830 470 ntBASIC3.87□□□□□ -1.79
CDH13P55290 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDH13P55290 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH13P55290 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH13P55290 AL079343.1-201ENST00000572358 1771 ntBASIC3.86□□□□□ -1.79
CDH13P55290 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH13P55290 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH13P55290 RNU6-761P-201ENST00000384148 107 ntBASIC3.86□□□□□ -1.79
CDH13P55290 RPL31P1-201ENST00000398116 372 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC119751.3-201ENST00000399720 670 ntBASIC3.86□□□□□ -1.79
CDH13P55290 HMGB1P17-201ENST00000403495 628 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AMD1P2-201ENST00000412936 992 ntBASIC3.86□□□□□ -1.79
CDH13P55290 TPT1P2-201ENST00000413105 503 ntBASIC3.86□□□□□ -1.79
CDH13P55290 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH13P55290 RPL7AP73-201ENST00000413490 353 ntBASIC3.86□□□□□ -1.79
CDH13P55290 FNDC3CP-201ENST00000420795 1155 ntBASIC3.86□□□□□ -1.79
CDH13P55290 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CDH13P55290 FAR2P4-202ENST00000425399 584 ntBASIC3.86□□□□□ -1.79
CDH13P55290 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.86□□□□□ -1.79
CDH13P55290 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH13P55290 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH13P55290 USP9YP7-201ENST00000436723 430 ntBASIC3.86□□□□□ -1.79
CDH13P55290 HMGB1P37-201ENST00000439613 609 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH13P55290 USP9YP32-201ENST00000452432 430 ntBASIC3.86□□□□□ -1.79
CDH13P55290 RPS15AP17-201ENST00000470598 390 ntBASIC3.86□□□□□ -1.79
CDH13P55290 RN7SL860P-201ENST00000473738 223 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 MTND2P14-201ENST00000482139 351 ntBASIC3.86□□□□□ -1.79
CDH13P55290 RPL5P23-201ENST00000496040 868 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 AC104986.1-201ENST00000517978 436 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH13P55290 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH13P55290 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH13P55290 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH13P55290 CYCSP29-201ENST00000533731 318 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC007424.1-203ENST00000554613 687 ntBASIC3.86□□□□□ -1.79
CDH13P55290 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.86□□□□□ -1.79
CDH13P55290 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH13P55290 LARP7P2-201ENST00000575306 125 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH13P55290 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CDH13P55290 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 VN1R82P-201ENST00000601481 356 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 AC124312.4-201ENST00000605533 310 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 AC080013.4-201ENST00000607624 649 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.86□□□□□ -1.79
CDH13P55290 AP000770.2-201ENST00000623694 100 ntBASIC3.86□□□□□ -1.79
CDH13P55290 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH13P55290 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDH13P55290 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CDH13P55290 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 AC006504.1-201ENST00000562493 3666 ntBASIC3.85□□□□□ -1.79
CDH13P55290 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 MTCO1P14-201ENST00000441695 1559 ntBASIC3.85□□□□□ -1.79
CDH13P55290 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CDH13P55290 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CDH13P55290 SNORD113-6-201ENST00000363345 75 ntBASIC3.85□□□□□ -1.79
CDH13P55290 RNU6-157P-201ENST00000383957 107 ntBASIC3.85□□□□□ -1.79
CDH13P55290 Y_RNA.493-201ENST00000384422 102 ntBASIC3.85□□□□□ -1.79
CDH13P55290 RNU6-837P-201ENST00000391056 108 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AL121972.1-201ENST00000402023 252 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AL138878.1-201ENST00000405131 347 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH13P55290 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH13P55290 AL008987.1-201ENST00000415528 237 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC006960.1-201ENST00000419980 153 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.85□□□□□ -1.79
CDH13P55290 AC092832.1-201ENST00000422934 400 ntBASIC3.85□□□□□ -1.79
CDH13P55290 AL049610.1-201ENST00000423374 372 ntBASIC3.85□□□□□ -1.79
CDH13P55290 HIGD1AP4-201ENST00000430194 280 ntBASIC3.85□□□□□ -1.79
CDH13P55290 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.85□□□□□ -1.79
CDH13P55290 MTND1P32-201ENST00000433043 938 ntBASIC3.85□□□□□ -1.79
CDH13P55290 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 TBCAP1-201ENST00000436520 327 ntBASIC3.85□□□□□ -1.79
CDH13P55290 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.85□□□□□ -1.79
CDH13P55290 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.85□□□□□ -1.79
CDH13P55290 MTND3P1-201ENST00000441336 220 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms