Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC147055.4-201ENST00000504399 745 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 RPF2P2-201ENST00000504693 896 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC093853.1-201ENST00000515689 483 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 RNU6-27P-201ENST00000516146 107 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 RN7SKP276-201ENST00000516242 268 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NR1H2P55055 OR4P1P-201ENST00000530808 1136 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC090888.1-201ENST00000561335 1141 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AL360157.1-201ENST00000565962 87 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC008782.1-201ENST00000603386 430 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AL596327.1-201ENST00000603629 213 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 Z94722.1-201ENST00000604328 474 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 HMGB1P50-201ENST00000605814 607 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC010424.2-201ENST00000607594 443 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AP002360.3-201ENST00000607673 710 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC093783.1-201ENST00000612976 329 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.25□□□□□ -1.73
NR1H2P55055 AC010608.2-201ENST00000624830 470 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC091925.2-201ENST00000625059 256 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC007671.2-201ENST00000637344 619 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 AC004925.1-201ENST00000624256 2706 ntBASIC4.25□□□□□ -1.73
NR1H2P55055 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NR1H2P55055 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
NR1H2P55055 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.24□□□□□ -1.73
NR1H2P55055 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NR1H2P55055 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NR1H2P55055 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 RNA5SP388-201ENST00000362584 119 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NR1H2P55055 RNA5SP306-201ENST00000411087 107 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H2P55055 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.24□□□□□ -1.73
NR1H2P55055 TBCAP2-201ENST00000416175 326 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H2P55055 AL590233.1-201ENST00000430017 456 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 EZH2P1-201ENST00000431167 291 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 BMS1P19-201ENST00000433925 393 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.24□□□□□ -1.73
NR1H2P55055 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.24□□□□□ -1.73
NR1H2P55055 HMGB3P22-202ENST00000451823 572 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H2P55055 AP001992.1-205ENST00000462248 379 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H2P55055 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.24□□□□□ -1.73
NR1H2P55055 ATP1B1P1-201ENST00000509767 915 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AP001880.2-201ENST00000538233 448 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.24□□□□□ -1.73
NR1H2P55055 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.24□□□□□ -1.73
NR1H2P55055 AL121603.1-201ENST00000553815 142 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AL049839.1-201ENST00000556151 657 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.24□□□□□ -1.73
NR1H2P55055 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H2P55055 AC109446.2-201ENST00000567872 497 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.24□□□□□ -1.73
NR1H2P55055 AC090615.1-201ENST00000577519 154 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC020914.4-201ENST00000597690 277 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC010201.1-201ENST00000605051 540 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AL121932.1-201ENST00000605542 214 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 AC079228.1-201ENST00000624774 1049 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 CRYM-AS1-204ENST00000637983 556 ntBASIC4.24□□□□□ -1.73
NR1H2P55055 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.24□□□□□ -1.73
NR1H2P55055 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NR1H2P55055 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NR1H2P55055 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NR1H2P55055 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NR1H2P55055 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NR1H2P55055 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NR1H2P55055 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NR1H2P55055 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NR1H2P55055 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NR1H2P55055 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
NR1H2P55055 SNORA31-201ENST00000362607 130 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 RNU6-462P-201ENST00000362659 105 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 SNORA51.2-201ENST00000364595 132 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 RPS23P10-201ENST00000416185 486 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AC083875.1-201ENST00000419509 405 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AC090960.1-201ENST00000421072 306 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AL365338.1-201ENST00000422282 858 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AL592293.2-201ENST00000422292 996 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AL022400.1-201ENST00000423946 935 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.23□□□□□ -1.73
NR1H2P55055 MUPP-201ENST00000438111 566 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AC016831.4-201ENST00000438302 307 ntBASIC4.23□□□□□ -1.73
NR1H2P55055 AL445567.1-201ENST00000439121 144 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms