Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 snoU109.6-201ENST00000516831 118 ntBASIC4.58□□□□□ -1.68
COPB1P53618 IGKV2-38-201ENST00000517443 247 ntBASIC4.58□□□□□ -1.68
COPB1P53618 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.58□□□□□ -1.68
COPB1P53618 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
COPB1P53618 SLC2A13P1-201ENST00000531560 322 ntBASIC4.58□□□□□ -1.68
COPB1P53618 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.58□□□□□ -1.68
COPB1P53618 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 AC010546.1-201ENST00000569391 485 ntBASIC4.58□□□□□ -1.68
COPB1P53618 AC107982.3-201ENST00000584957 985 ntBASIC4.58□□□□□ -1.68
COPB1P53618 AC239868.4-201ENST00000608318 671 ntBASIC4.58□□□□□ -1.68
COPB1P53618 AC018816.2-201ENST00000621460 353 ntBASIC4.58□□□□□ -1.68
COPB1P53618 BMS1P21-201ENST00000634565 365 ntBASIC4.58□□□□□ -1.68
COPB1P53618 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
COPB1P53618 MARK2P15-201ENST00000432204 2186 ntBASIC4.58□□□□□ -1.68
COPB1P53618 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COPB1P53618 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COPB1P53618 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COPB1P53618 AC134882.1-201ENST00000603738 1676 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC092162.3-201ENST00000624511 1624 ntBASIC4.57□□□□□ -1.68
COPB1P53618 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 Y_RNA.25-201ENST00000362528 102 ntBASIC4.57□□□□□ -1.68
COPB1P53618 RNU6-433P-201ENST00000363216 104 ntBASIC4.57□□□□□ -1.68
COPB1P53618 RNU6-374P-201ENST00000364146 108 ntBASIC4.57□□□□□ -1.68
COPB1P53618 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 MTCO3P1-205ENST00000422088 832 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 RPS12P5-201ENST00000423449 371 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 AC011998.1-201ENST00000433403 117 ntBASIC4.57□□□□□ -1.68
COPB1P53618 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 AC092641.1-201ENST00000440229 772 ntBASIC4.57□□□□□ -1.68
COPB1P53618 USP9YP29-201ENST00000445112 563 ntBASIC4.57□□□□□ -1.68
COPB1P53618 ST13P20-201ENST00000447996 1065 ntBASIC4.57□□□□□ -1.68
COPB1P53618 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 SLC31A1P1-201ENST00000451221 567 ntBASIC4.57□□□□□ -1.68
COPB1P53618 HMGB3P22-202ENST00000451823 572 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.57□□□□□ -1.68
COPB1P53618 RPL30P9-201ENST00000465586 330 ntBASIC4.57□□□□□ -1.68
COPB1P53618 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.57□□□□□ -1.68
COPB1P53618 AC026979.1-201ENST00000492525 396 ntBASIC4.57□□□□□ -1.68
COPB1P53618 RN7SL691P-201ENST00000494487 301 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 AC109458.1-201ENST00000508858 316 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 RNA5SP519-201ENST00000516480 119 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC008802.1-201ENST00000519121 791 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.57□□□□□ -1.68
COPB1P53618 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.57□□□□□ -1.68
COPB1P53618 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 PSMB7P1-201ENST00000556349 514 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC090515.3-201ENST00000560431 315 ntBASIC4.57□□□□□ -1.68
COPB1P53618 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 SULT1C2P2-201ENST00000562517 294 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC136624.4-201ENST00000573044 370 ntBASIC4.57□□□□□ -1.68
COPB1P53618 MIR4277-201ENST00000578298 84 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC008687.2-201ENST00000597865 520 ntBASIC4.57□□□□□ -1.68
COPB1P53618 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 AC107304.1-201ENST00000604229 296 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC090948.1-201ENST00000607464 549 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.57□□□□□ -1.68
COPB1P53618 AC073968.1-201ENST00000618594 637 ntBASIC4.57□□□□□ -1.68
COPB1P53618 AC099842.1-201ENST00000619919 596 ntBASIC4.57□□□□□ -1.68
COPB1P53618 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 AL356266.1-201ENST00000623311 483 ntBASIC4.57□□□□□ -1.68
COPB1P53618 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.57□□□□□ -1.68
COPB1P53618 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COPB1P53618 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
COPB1P53618 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.56□□□□□ -1.68
COPB1P53618 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.56□□□□□ -1.68
COPB1P53618 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.56□□□□□ -1.68
COPB1P53618 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COPB1P53618 RPL21P132-201ENST00000331267 462 ntBASIC4.56□□□□□ -1.68
COPB1P53618 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
COPB1P53618 RNU6-1119P-201ENST00000384349 108 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms