Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-462P-201ENST00000362659 105 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 RNA5SP502-201ENST00000362694 119 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 Y_RNA.77-201ENST00000362962 107 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 RNA5SP513-201ENST00000364648 118 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 SNORA51.8-201ENST00000384234 132 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 Y_RNA.493-201ENST00000384422 102 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NKX2-1P43699 RNA5SP332-201ENST00000391063 115 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 U3.29-201ENST00000391296 212 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-1P43699 RNA5SP113-201ENST00000410486 84 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 RPS15AP38-201ENST00000413110 372 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-1P43699 BX510359.2-201ENST00000417920 305 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AIMP1P1-201ENST00000418670 937 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 MTCO2P5-201ENST00000422621 426 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC092832.1-201ENST00000422934 400 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AL132765.1-201ENST00000434165 553 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 RPL23AP89-201ENST00000439324 255 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AL591503.2-201ENST00000442314 1005 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 MTND2P4-201ENST00000445034 1004 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-1P43699 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.52□□□□□ -1.85
NKX2-1P43699 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AL445669.2-201ENST00000454425 421 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 RPL31P3-201ENST00000458430 332 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 SETP11-201ENST00000473027 690 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 MTND3P7-201ENST00000474435 343 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC078817.1-201ENST00000492623 435 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 TMEM251P1-201ENST00000503717 318 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.52□□□□□ -1.85
NKX2-1P43699 NDUFB5P1-201ENST00000508134 564 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-1P43699 LTV1P1-201ENST00000510683 1237 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-1P43699 RN7SKP276-201ENST00000516242 268 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.52□□□□□ -1.85
NKX2-1P43699 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AP001922.4-201ENST00000526967 290 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-1P43699 EEF1B2P4-201ENST00000551398 348 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC016180.1-201ENST00000567945 403 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC004223.2-201ENST00000590309 544 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AL031985.2-201ENST00000600955 480 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC013244.1-201ENST00000604279 193 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC011939.3-201ENST00000613686 466 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AL357080.1-201ENST00000617394 239 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AL031667.3-201ENST00000620124 655 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC004009.2-201ENST00000623016 728 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC004777.1-201ENST00000624317 287 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC091965.5-201ENST00000624785 342 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 AC127502.3-201ENST00000636170 1206 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC027287.1-201ENST00000553115 1453 ntBASIC3.52□□□□□ -1.85
NKX2-1P43699 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NKX2-1P43699 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
NKX2-1P43699 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
NKX2-1P43699 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 AL513185.3-201ENST00000433335 1300 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NKX2-1P43699 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NKX2-1P43699 SNORD51-201ENST00000384320 80 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.51□□□□□ -1.85
NKX2-1P43699 SNORA3C-201ENST00000408792 125 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 TPMTP2-201ENST00000414372 726 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 GLRXP1-201ENST00000423261 334 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 MTCO3P5-201ENST00000433620 714 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 MTND4P32-201ENST00000437189 1237 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 MTCYBP39-201ENST00000437562 491 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 PTMAP6-201ENST00000439110 327 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AC114495.1-201ENST00000441274 436 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 UBE2D3P4-201ENST00000441973 436 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AC118469.1-201ENST00000442943 488 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC009961.3-201ENST00000449832 765 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 HMGB3P22-202ENST00000451823 572 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 RPS27AP8-201ENST00000452665 445 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-1P43699 HIGD1AP8-201ENST00000453927 274 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 AP000873.1-201ENST00000463987 400 ntBASIC3.51□□□□□ -1.85
NKX2-1P43699 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.51□□□□□ -1.85
NKX2-1P43699 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms