Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC008837.2-201ENST00000513076 418 ntBASIC3.88□□□□□ -1.79
CDH3P22223 IGKV2-23-201ENST00000518729 323 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH3P22223 AC091516.1-201ENST00000549191 703 ntBASIC3.88□□□□□ -1.79
CDH3P22223 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AC090695.1-201ENST00000561269 1222 ntBASIC3.88□□□□□ -1.79
CDH3P22223 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH3P22223 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH3P22223 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH3P22223 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.88□□□□□ -1.79
CDH3P22223 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH3P22223 AP000255.1-201ENST00000610276 676 ntBASIC3.88□□□□□ -1.79
CDH3P22223 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CDH3P22223 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH3P22223 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH3P22223 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CDH3P22223 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH3P22223 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH3P22223 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
CDH3P22223 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 Z99496.1-201ENST00000469424 1477 ntBASIC3.87□□□□□ -1.79
CDH3P22223 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 RNU1-18P-201ENST00000363062 164 ntBASIC3.87□□□□□ -1.79
CDH3P22223 RN7SKP280-201ENST00000364196 304 ntBASIC3.87□□□□□ -1.79
CDH3P22223 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 RNU6-1300P-201ENST00000391046 108 ntBASIC3.87□□□□□ -1.79
CDH3P22223 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 AC025750.1-201ENST00000399891 379 ntBASIC3.87□□□□□ -1.79
CDH3P22223 TMSB4XP8-201ENST00000402089 135 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AL445189.1-201ENST00000405722 338 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AL590084.1-201ENST00000407885 387 ntBASIC3.87□□□□□ -1.79
CDH3P22223 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AL161449.1-201ENST00000414531 1199 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 TMSB4XP6-201ENST00000415187 135 ntBASIC3.87□□□□□ -1.79
CDH3P22223 RPS24P7-201ENST00000416921 246 ntBASIC3.87□□□□□ -1.79
CDH3P22223 BOLA3P4-201ENST00000418151 400 ntBASIC3.87□□□□□ -1.79
CDH3P22223 TMSB4XP1-201ENST00000424567 135 ntBASIC3.87□□□□□ -1.79
CDH3P22223 RPL36P19-201ENST00000430744 301 ntBASIC3.87□□□□□ -1.79
CDH3P22223 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.87□□□□□ -1.79
CDH3P22223 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 AC092393.1-201ENST00000439625 742 ntBASIC3.87□□□□□ -1.79
CDH3P22223 RPS29P7-201ENST00000439662 171 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH3P22223 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 RN7SL93P-201ENST00000463035 293 ntBASIC3.87□□□□□ -1.79
CDH3P22223 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH3P22223 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 BTF3L4P4-201ENST00000506381 449 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 MTCYBP16-201ENST00000509187 1129 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH3P22223 RNU6-1231P-201ENST00000517185 103 ntBASIC3.87□□□□□ -1.79
CDH3P22223 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC026407.1-201ENST00000518369 204 ntBASIC3.87□□□□□ -1.79
CDH3P22223 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 AC087808.1-201ENST00000520501 361 ntBASIC3.87□□□□□ -1.79
CDH3P22223 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH3P22223 AC009097.3-201ENST00000563557 1018 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC022069.1-201ENST00000582910 658 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH3P22223 AC093227.2-201ENST00000589357 285 ntBASIC3.87□□□□□ -1.79
CDH3P22223 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 AL592436.1-201ENST00000605135 558 ntBASIC3.87□□□□□ -1.79
CDH3P22223 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.87□□□□□ -1.79
CDH3P22223 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 AC109809.1-201ENST00000619665 545 ntBASIC3.87□□□□□ -1.79
CDH3P22223 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 AP000676.4-201ENST00000624659 623 ntBASIC3.87□□□□□ -1.79
CDH3P22223 DBF4P1-201ENST00000412976 1892 ntBASIC3.87□□□□□ -1.79
CDH3P22223 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CDH3P22223 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH3P22223 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH3P22223 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH3P22223 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
CDH3P22223 ZNF876P-202ENST00000398732 1485 ntBASIC3.86□□□□□ -1.79
CDH3P22223 FAM91A3P-201ENST00000456826 2544 ntBASIC3.86□□□□□ -1.79
CDH3P22223 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.86□□□□□ -1.79
CDH3P22223 RNU6-115P-201ENST00000364310 107 ntBASIC3.86□□□□□ -1.79
CDH3P22223 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.86□□□□□ -1.79
CDH3P22223 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CDH3P22223 Y_RNA.408-201ENST00000383987 102 ntBASIC3.86□□□□□ -1.79
CDH3P22223 U1.1-201ENST00000384101 164 ntBASIC3.86□□□□□ -1.79
CDH3P22223 MIR1251-201ENST00000408552 70 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms