Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AC079684.1-201ENST00000621405 437 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AL161637.1-201ENST00000622380 412 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 ZNF663P-202ENST00000641770 1131 ntBASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DPA1P20036 AP004289.2-201ENST00000444413 1457 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC024560.2-201ENST00000507981 1497 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 RNA5SP295-201ENST00000362655 121 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 RNA5SP322-201ENST00000363617 119 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 RNU6-236P-201ENST00000363886 106 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 MIR30B-201ENST00000384850 88 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL159169.1-201ENST00000421119 127 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL591419.1-201ENST00000427423 339 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC122718.1-201ENST00000439448 744 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL359073.1-201ENST00000448036 403 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 HMGN1P5-201ENST00000448591 263 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 FAM133DP-201ENST00000464802 691 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC013828.1-201ENST00000481845 158 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 RNA5SP468-201ENST00000516782 93 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 RNA5SP143-201ENST00000516936 115 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC090502.2-201ENST00000549267 280 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC090666.1-201ENST00000578241 445 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 AL451086.1-201ENST00000605596 223 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 XIST_intron.1-201ENST00000619444 68 ntBASIC3.79□□□□□ -1.8
HLA-DPA1P20036 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HLA-DPA1P20036 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 GDI2P1-201ENST00000429312 1336 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AL645568.2-201ENST00000432815 1337 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 PTMAP5-201ENST00000393073 333 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 ATP5F1P4-201ENST00000397288 746 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 RN7SKP202-201ENST00000410439 330 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CYCSP19-201ENST00000411715 316 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC069282.1-201ENST00000411911 526 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 RAC1P8-201ENST00000427086 527 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 RN7SL93P-201ENST00000463035 293 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC092754.2-201ENST00000463506 460 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC015908.1-201ENST00000478739 476 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 RPL7P47-201ENST00000497299 556 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC008837.1-201ENST00000511513 412 ntBASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DPA1P20036 MTND1P36-201ENST00000522384 936 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms