Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 RNU6-492P-201ENST00000363035 104 ntBASIC4.35□□□□□ -1.71
MMP3P08254 Y_RNA.311-201ENST00000365068 96 ntBASIC4.35□□□□□ -1.71
MMP3P08254 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 SNORA3C-201ENST00000408792 125 ntBASIC4.35□□□□□ -1.71
MMP3P08254 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.35□□□□□ -1.71
MMP3P08254 LUZP4P1-201ENST00000415420 344 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 AC009237.2-201ENST00000421358 284 ntBASIC4.35□□□□□ -1.71
MMP3P08254 PDSS1P1-201ENST00000422953 1114 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AL022400.1-201ENST00000423946 935 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC009965.2-201ENST00000425328 970 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 Z74696.2-201ENST00000436514 498 ntBASIC4.35□□□□□ -1.71
MMP3P08254 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 AL606662.1-201ENST00000445763 553 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 AL133162.1-201ENST00000463228 453 ntBASIC4.35□□□□□ -1.71
MMP3P08254 SYPL1P1-201ENST00000473622 768 ntBASIC4.35□□□□□ -1.71
MMP3P08254 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP3P08254 UBE2CP3-201ENST00000502715 450 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 SNORA48.10-201ENST00000516965 160 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.35□□□□□ -1.71
MMP3P08254 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.35□□□□□ -1.71
MMP3P08254 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.35□□□□□ -1.71
MMP3P08254 HMGB3P26-201ENST00000560051 582 ntBASIC4.35□□□□□ -1.71
MMP3P08254 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.35□□□□□ -1.71
MMP3P08254 AC146944.4-201ENST00000602697 718 ntBASIC4.35□□□□□ -1.71
MMP3P08254 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.35□□□□□ -1.71
MMP3P08254 AL049634.3-201ENST00000604968 457 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AL031666.3-201ENST00000609320 1006 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC084757.4-201ENST00000616350 526 ntBASIC4.35□□□□□ -1.71
MMP3P08254 AC012314.7-201ENST00000619693 93 ntBASIC4.35□□□□□ -1.71
MMP3P08254 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
MMP3P08254 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
MMP3P08254 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 ELL2P3-201ENST00000457883 1602 ntBASIC4.35□□□□□ -1.71
MMP3P08254 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MMP3P08254 AC087359.1-201ENST00000508335 1740 ntBASIC4.35□□□□□ -1.71
MMP3P08254 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP3P08254 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.71
MMP3P08254 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP3P08254 OR10J6P-201ENST00000289731 930 ntBASIC4.34□□□□□ -1.71
MMP3P08254 Y_RNA.560-201ENST00000384689 102 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AC007066.1-201ENST00000392902 381 ntBASIC4.34□□□□□ -1.71
MMP3P08254 PRRC2CP1-201ENST00000404428 159 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.34□□□□□ -1.71
MMP3P08254 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
MMP3P08254 HSFY4P-201ENST00000415994 1181 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 SYF2P2-201ENST00000417620 583 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AC092634.6-201ENST00000418558 192 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AL139247.1-201ENST00000422768 325 ntBASIC4.34□□□□□ -1.71
MMP3P08254 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP3P08254 AL513175.1-201ENST00000431492 780 ntBASIC4.34□□□□□ -1.71
MMP3P08254 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 AC010881.1-201ENST00000433830 235 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 ELOCP8-201ENST00000439309 332 ntBASIC4.34□□□□□ -1.71
MMP3P08254 ELOCP15-201ENST00000442090 332 ntBASIC4.34□□□□□ -1.71
MMP3P08254 RANP8-201ENST00000444720 713 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AL034418.1-201ENST00000448675 860 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 RN7SL585P-201ENST00000470538 280 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AC104689.1-201ENST00000473356 768 ntBASIC4.34□□□□□ -1.71
MMP3P08254 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
MMP3P08254 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.34□□□□□ -1.71
MMP3P08254 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 AC090819.1-201ENST00000523800 1111 ntBASIC4.34□□□□□ -1.71
MMP3P08254 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
MMP3P08254 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 AC012435.1-202ENST00000568772 240 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.34□□□□□ -1.71
MMP3P08254 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP3P08254 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.34□□□□□ -1.71
MMP3P08254 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.34□□□□□ -1.71
MMP3P08254 AC123786.2-201ENST00000603459 275 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AC122133.1-201ENST00000613964 233 ntBASIC4.34□□□□□ -1.71
MMP3P08254 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
MMP3P08254 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.34□□□□□ -1.71
MMP3P08254 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.34□□□□□ -1.71
MMP3P08254 MKKS-204ENST00000639674 192 ntBASIC4.34□□□□□ -1.71
MMP3P08254 AL451142.2-201ENST00000429076 2090 ntBASIC4.34□□□□□ -1.71
MMP3P08254 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
MMP3P08254 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.34□□□□□ -1.72
MMP3P08254 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
MMP3P08254 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms