Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.42□□□□□ -1.86
TPM3P06753 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TPM3P06753 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM3P06753 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.42□□□□□ -1.86
TPM3P06753 AL590004.2-201ENST00000404787 371 ntBASIC3.42□□□□□ -1.86
TPM3P06753 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
TPM3P06753 RNU2-65P-201ENST00000410162 185 ntBASIC3.42□□□□□ -1.86
TPM3P06753 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM3P06753 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.42□□□□□ -1.86
TPM3P06753 TOMM22P1-201ENST00000418578 312 ntBASIC3.42□□□□□ -1.86
TPM3P06753 ATG3P1-201ENST00000419507 911 ntBASIC3.42□□□□□ -1.86
TPM3P06753 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM3P06753 RSL24D1P2-201ENST00000445584 366 ntBASIC3.42□□□□□ -1.86
TPM3P06753 AC069540.1-201ENST00000446320 988 ntBASIC3.42□□□□□ -1.86
TPM3P06753 RPL26P28-201ENST00000451325 435 ntBASIC3.42□□□□□ -1.86
TPM3P06753 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.42□□□□□ -1.86
TPM3P06753 OR6K1P-201ENST00000456766 971 ntBASIC3.42□□□□□ -1.86
TPM3P06753 RN7SL20P-201ENST00000488827 297 ntBASIC3.42□□□□□ -1.86
TPM3P06753 AC110794.1-201ENST00000505816 425 ntBASIC3.42□□□□□ -1.86
TPM3P06753 HMGN1P15-201ENST00000513870 295 ntBASIC3.42□□□□□ -1.86
TPM3P06753 MTND4LP31-201ENST00000514859 294 ntBASIC3.42□□□□□ -1.86
TPM3P06753 OR5B10P-201ENST00000532869 642 ntBASIC3.42□□□□□ -1.86
TPM3P06753 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM3P06753 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.42□□□□□ -1.86
TPM3P06753 MIR4700-201ENST00000578311 74 ntBASIC3.42□□□□□ -1.86
TPM3P06753 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
TPM3P06753 AL121772.2-201ENST00000614331 297 ntBASIC3.42□□□□□ -1.86
TPM3P06753 AC091046.2-201ENST00000620775 665 ntBASIC3.42□□□□□ -1.86
TPM3P06753 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TPM3P06753 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM3P06753 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TPM3P06753 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TPM3P06753 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TPM3P06753 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TPM3P06753 USP9YP36-201ENST00000424581 829 ntBASIC3.41□□□□□ -1.86
TPM3P06753 AL445584.1-201ENST00000431451 330 ntBASIC3.41□□□□□ -1.86
TPM3P06753 RPL21P110-201ENST00000433345 446 ntBASIC3.41□□□□□ -1.86
TPM3P06753 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TPM3P06753 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.41□□□□□ -1.86
TPM3P06753 XKRYP6-201ENST00000440468 1116 ntBASIC3.41□□□□□ -1.86
TPM3P06753 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM3P06753 XKRYP3-201ENST00000442113 1116 ntBASIC3.41□□□□□ -1.86
TPM3P06753 NUTF2P7-201ENST00000453086 375 ntBASIC3.41□□□□□ -1.86
TPM3P06753 snoU13.7-201ENST00000459220 104 ntBASIC3.41□□□□□ -1.86
TPM3P06753 RPL21P41-201ENST00000459863 264 ntBASIC3.41□□□□□ -1.86
TPM3P06753 RPS17P11-201ENST00000474297 293 ntBASIC3.41□□□□□ -1.86
TPM3P06753 RPS27AP9-201ENST00000477681 438 ntBASIC3.41□□□□□ -1.86
TPM3P06753 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM3P06753 AC021678.1-201ENST00000505195 936 ntBASIC3.41□□□□□ -1.86
TPM3P06753 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.41□□□□□ -1.86
TPM3P06753 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.41□□□□□ -1.86
TPM3P06753 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM3P06753 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM3P06753 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM3P06753 AL049874.4-201ENST00000557593 255 ntBASIC3.41□□□□□ -1.86
TPM3P06753 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.41□□□□□ -1.86
TPM3P06753 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.41□□□□□ -1.86
TPM3P06753 SNORD84-203ENST00000584275 78 ntBASIC3.41□□□□□ -1.86
TPM3P06753 DUXAP4-201ENST00000603046 613 ntBASIC3.41□□□□□ -1.86
TPM3P06753 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM3P06753 AC004696.1-201ENST00000614345 607 ntBASIC3.41□□□□□ -1.86
TPM3P06753 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.41□□□□□ -1.86
TPM3P06753 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.41□□□□□ -1.86
TPM3P06753 AL034408.1-202ENST00000636088 415 ntBASIC3.41□□□□□ -1.86
TPM3P06753 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TPM3P06753 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TPM3P06753 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TPM3P06753 RPL7P25-201ENST00000404151 721 ntBASIC3.4□□□□□ -1.87
TPM3P06753 BTBD10P2-201ENST00000404779 676 ntBASIC3.4□□□□□ -1.87
TPM3P06753 RNA5SP492-201ENST00000411330 114 ntBASIC3.4□□□□□ -1.87
TPM3P06753 HSFY4P-201ENST00000415994 1181 ntBASIC3.4□□□□□ -1.87
TPM3P06753 SYF2P2-201ENST00000417620 583 ntBASIC3.4□□□□□ -1.87
TPM3P06753 MTCO3P4-201ENST00000419236 787 ntBASIC3.4□□□□□ -1.87
TPM3P06753 AC023128.2-201ENST00000420880 1223 ntBASIC3.4□□□□□ -1.87
TPM3P06753 RPL21P66-201ENST00000426566 466 ntBASIC3.4□□□□□ -1.87
TPM3P06753 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.4□□□□□ -1.87
TPM3P06753 RPS29P6-201ENST00000438196 145 ntBASIC3.4□□□□□ -1.87
TPM3P06753 Z77249.1-201ENST00000444622 1175 ntBASIC3.4□□□□□ -1.87
TPM3P06753 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.4□□□□□ -1.87
TPM3P06753 RPL23AP20-201ENST00000447965 421 ntBASIC3.4□□□□□ -1.87
TPM3P06753 MTND3P6-201ENST00000485242 339 ntBASIC3.4□□□□□ -1.87
TPM3P06753 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.4□□□□□ -1.87
TPM3P06753 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.4□□□□□ -1.87
TPM3P06753 HSPD1P15-201ENST00000505573 1122 ntBASIC3.4□□□□□ -1.87
TPM3P06753 AC098799.2-201ENST00000509466 868 ntBASIC3.4□□□□□ -1.87
TPM3P06753 AP001207.1-201ENST00000524051 481 ntBASIC3.4□□□□□ -1.87
TPM3P06753 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM3P06753 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.4□□□□□ -1.87
TPM3P06753 AL355596.1-201ENST00000565399 3996 ntBASIC3.4□□□□□ -1.87
TPM3P06753 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.4□□□□□ -1.87
TPM3P06753 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.4□□□□□ -1.87
TPM3P06753 VN1R85P-201ENST00000601587 426 ntBASIC3.4□□□□□ -1.87
TPM3P06753 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
TPM3P06753 AL359535.1-201ENST00000612100 1087 ntBASIC3.4□□□□□ -1.87
TPM3P06753 AC009464.1-201ENST00000615731 469 ntBASIC3.4□□□□□ -1.87
TPM3P06753 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.4□□□□□ -1.87
TPM3P06753 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TPM3P06753 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM3P06753 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM3P06753 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms