Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOAP06340 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 RPL21P132-201ENST00000331267 462 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RNU6-433P-201ENST00000363216 104 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RNU6-694P-201ENST00000364071 147 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RNU6-225P-201ENST00000384613 103 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RPL23AP29-201ENST00000397284 453 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 MTCO3P31-201ENST00000405526 789 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 MIR1271-201ENST00000408537 86 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RNU2-22P-201ENST00000411266 212 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RNU2-6P-201ENST00000411404 190 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AL450992.3-201ENST00000413192 568 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC239367.2-201ENST00000447309 705 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AL359073.1-201ENST00000448036 403 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC007537.2-201ENST00000472093 511 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC126182.1-201ENST00000478134 357 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC108064.1-201ENST00000513791 460 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 RNU6-1178P-201ENST00000516674 107 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 RPS3AP4-201ENST00000555161 764 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 MIR1254-2-201ENST00000579553 63 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 MIR548S-201ENST00000581352 82 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC022916.3-201ENST00000592961 742 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 LARP7P1-201ENST00000605576 316 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC107214.2-201ENST00000608204 634 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC022106.2-201ENST00000620114 757 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC022140.2-201ENST00000623500 188 ntBASIC4.96□□□□□ -1.62
HLA-DOAP06340 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOAP06340 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOAP06340 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOAP06340 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DOAP06340 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DOAP06340 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL592182.3-201ENST00000642132 3304 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 PROS2P-201ENST00000474651 1951 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 OR4G2P-201ENST00000328113 903 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 Y_RNA.88-201ENST00000363029 99 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 RNU6-1066P-201ENST00000363573 105 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 SNORD116-23-201ENST00000384645 92 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 NCSTNP1-201ENST00000406229 144 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 RN7SKP167-201ENST00000411047 285 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL136133.1-201ENST00000413694 376 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 BOLA3P4-201ENST00000418151 400 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL121878.1-201ENST00000418638 859 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC093698.1-201ENST00000423843 571 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC073069.1-201ENST00000428657 441 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL356276.2-201ENST00000435919 558 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC091862.1-201ENST00000438016 1100 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 RAB11AP1-201ENST00000442978 646 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 ABCF2P2-201ENST00000450549 296 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 RPL38P1-201ENST00000460914 211 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 RPL7P38-201ENST00000488396 739 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 RNA5SP135-201ENST00000517019 125 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC008802.1-201ENST00000519121 791 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 PHBP17-201ENST00000528576 541 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC020914.6-201ENST00000594327 272 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 VN1R92P-201ENST00000598511 928 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 LSM1P2-201ENST00000604911 322 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AC019226.1-201ENST00000625666 515 ntBASIC4.95□□□□□ -1.62
HLA-DOAP06340 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DOAP06340 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DOAP06340 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms