Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.9□□□□□ -1.79
COL2A1P02458 AC093732.2-201ENST00000607950 274 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 RNU6-1192P-201ENST00000612197 107 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL2A1P02458 AC011939.3-201ENST00000613686 466 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC009318.3-201ENST00000616916 503 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 RNU6-489P-201ENST00000618289 107 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.9□□□□□ -1.79
COL2A1P02458 LINC02211-204ENST00000642024 1070 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL2A1P02458 AC005183.1-201ENST00000603687 1979 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC020633.1-201ENST00000468439 2247 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL2A1P02458 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL2A1P02458 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.89□□□□□ -1.79
COL2A1P02458 AC073073.2-201ENST00000609827 2578 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 OR5H2-201ENST00000355273 945 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
COL2A1P02458 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
COL2A1P02458 SNORD51.1-201ENST00000365405 77 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 SNORA7.4-201ENST00000384249 137 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AL049545.1-201ENST00000401856 572 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 RNU4-27P-201ENST00000410889 139 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC107081.1-201ENST00000414975 361 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 TIMM9P2-201ENST00000419324 266 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.89□□□□□ -1.79
COL2A1P02458 AL158071.1-201ENST00000430315 461 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC010153.1-201ENST00000432862 727 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.89□□□□□ -1.79
COL2A1P02458 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.89□□□□□ -1.79
COL2A1P02458 Z73417.1-201ENST00000447373 778 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC092155.2-201ENST00000454675 477 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.89□□□□□ -1.79
COL2A1P02458 RN7SL863P-201ENST00000462370 296 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC090543.1-201ENST00000492168 485 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.89□□□□□ -1.79
COL2A1P02458 FCF1P3-201ENST00000496394 590 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 MTCO1P31-201ENST00000506355 492 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL2A1P02458 MRPS36P3-201ENST00000519284 130 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AP001207.2-201ENST00000519490 539 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC010376.1-201ENST00000522101 334 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.89□□□□□ -1.79
COL2A1P02458 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.89□□□□□ -1.79
COL2A1P02458 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.89□□□□□ -1.79
COL2A1P02458 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.89□□□□□ -1.79
COL2A1P02458 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.89□□□□□ -1.79
COL2A1P02458 AP001094.1-201ENST00000579805 193 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC103987.3-201ENST00000582071 292 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL2A1P02458 AL162274.2-201ENST00000614406 332 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.89□□□□□ -1.79
COL2A1P02458 MIR1264-201ENST00000616374 69 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC092184.1-201ENST00000625042 715 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.89□□□□□ -1.79
COL2A1P02458 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.89□□□□□ -1.79
COL2A1P02458 AC090582.1-201ENST00000636321 199 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 AC083865.1-201ENST00000636634 831 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL2A1P02458 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.89□□□□□ -1.79
COL2A1P02458 MTCO1P7-201ENST00000419523 1542 ntBASIC3.89□□□□□ -1.79
COL2A1P02458 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL2A1P02458 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
COL2A1P02458 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 RNU1-140P-201ENST00000365040 165 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 SNORA44-201ENST00000384584 132 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 RNU6-1242P-201ENST00000391052 103 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 LAP3P1-201ENST00000403648 294 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 MTATP6P20-201ENST00000414147 562 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 AC090960.1-201ENST00000421072 306 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 AL353678.1-201ENST00000422735 741 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.88□□□□□ -1.79
COL2A1P02458 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.88□□□□□ -1.79
COL2A1P02458 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.88□□□□□ -1.79
COL2A1P02458 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 MTCYBP37-201ENST00000510642 1133 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 AC107934.2-201ENST00000518653 310 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.88□□□□□ -1.79
COL2A1P02458 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.88□□□□□ -1.79
COL2A1P02458 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.88□□□□□ -1.79
COL2A1P02458 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.88□□□□□ -1.79
COL2A1P02458 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.88□□□□□ -1.79
COL2A1P02458 AC068790.6-201ENST00000602558 258 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 AC107952.2-201ENST00000606048 486 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 MIR7106-201ENST00000612419 65 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 AL031667.3-201ENST00000620124 655 ntBASIC3.88□□□□□ -1.79
COL2A1P02458 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.88□□□□□ -1.79
COL2A1P02458 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.88□□□□□ -1.79
COL2A1P02458 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
COL2A1P02458 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
COL2A1P02458 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.87□□□□□ -1.79
COL2A1P02458 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
COL2A1P02458 SNORD115-48-201ENST00000364764 76 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms