Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
MBD4O95243 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MBD4O95243 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MBD4O95243 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
MBD4O95243 XIAPP3-201ENST00000312918 795 ntBASIC4.55□□□□□ -1.68
MBD4O95243 Y_RNA.493-201ENST00000384422 102 ntBASIC4.55□□□□□ -1.68
MBD4O95243 RNA5SP56-201ENST00000410277 118 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AL356320.2-201ENST00000417263 507 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AL513175.2-201ENST00000422071 443 ntBASIC4.55□□□□□ -1.68
MBD4O95243 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.55□□□□□ -1.68
MBD4O95243 AC018644.1-201ENST00000429934 551 ntBASIC4.55□□□□□ -1.68
MBD4O95243 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.55□□□□□ -1.68
MBD4O95243 MTCO2P25-201ENST00000447065 681 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AL009048.1-201ENST00000450437 298 ntBASIC4.55□□□□□ -1.68
MBD4O95243 UBDP1-202ENST00000457888 382 ntBASIC4.55□□□□□ -1.68
MBD4O95243 snoU13.3-201ENST00000459441 104 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AL133162.1-201ENST00000463228 453 ntBASIC4.55□□□□□ -1.68
MBD4O95243 PABPC1P3-201ENST00000469174 459 ntBASIC4.55□□□□□ -1.68
MBD4O95243 SYPL1P1-201ENST00000473622 768 ntBASIC4.55□□□□□ -1.68
MBD4O95243 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MBD4O95243 AC084198.1-201ENST00000477747 402 ntBASIC4.55□□□□□ -1.68
MBD4O95243 ACTR3P3-201ENST00000480448 893 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.55□□□□□ -1.68
MBD4O95243 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
MBD4O95243 AC114322.1-201ENST00000506771 926 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AC010460.2-201ENST00000509054 677 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.55□□□□□ -1.68
MBD4O95243 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.55□□□□□ -1.68
MBD4O95243 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.55□□□□□ -1.68
MBD4O95243 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.55□□□□□ -1.68
MBD4O95243 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.55□□□□□ -1.68
MBD4O95243 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.55□□□□□ -1.68
MBD4O95243 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.55□□□□□ -1.68
MBD4O95243 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.55□□□□□ -1.68
MBD4O95243 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.55□□□□□ -1.68
MBD4O95243 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.55□□□□□ -1.68
MBD4O95243 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.55□□□□□ -1.68
MBD4O95243 HMGN2P28-201ENST00000606102 262 ntBASIC4.55□□□□□ -1.68
MBD4O95243 SNORA62.6-201ENST00000606322 83 ntBASIC4.55□□□□□ -1.68
MBD4O95243 AC073968.1-201ENST00000618594 637 ntBASIC4.55□□□□□ -1.68
MBD4O95243 C2orf27A-204ENST00000623058 969 ntBASIC4.55□□□□□ -1.68
MBD4O95243 CR392039.5-201ENST00000623201 510 ntBASIC4.55□□□□□ -1.68
MBD4O95243 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MBD4O95243 AC012442.3-202ENST00000636742 206 ntBASIC4.55□□□□□ -1.68
MBD4O95243 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MBD4O95243 CDR1-202ENST00000625883 1485 ntBASIC4.55□□□□□ -1.68
MBD4O95243 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MBD4O95243 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.55□□□□□ -1.68
MBD4O95243 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 GDI2P1-201ENST00000429312 1336 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC109315.1-201ENST00000584143 1347 ntBASIC4.54□□□□□ -1.68
MBD4O95243 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
MBD4O95243 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MBD4O95243 SNORD3H-201ENST00000384486 214 ntBASIC4.54□□□□□ -1.68
MBD4O95243 RNU6-837P-201ENST00000391056 108 ntBASIC4.54□□□□□ -1.68
MBD4O95243 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 AL161449.1-201ENST00000414531 1199 ntBASIC4.54□□□□□ -1.68
MBD4O95243 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.54□□□□□ -1.68
MBD4O95243 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.54□□□□□ -1.68
MBD4O95243 AL133547.1-201ENST00000448546 220 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.54□□□□□ -1.68
MBD4O95243 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 AC005410.1-202ENST00000460347 485 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC093767.1-201ENST00000504523 156 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 SNORA67.7-201ENST00000516664 135 ntBASIC4.54□□□□□ -1.68
MBD4O95243 TRMT10BP1-201ENST00000519377 943 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC005832.3-201ENST00000537929 631 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.54□□□□□ -1.68
MBD4O95243 AC125611.1-201ENST00000549563 229 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.54□□□□□ -1.68
MBD4O95243 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.54□□□□□ -1.68
MBD4O95243 MIR3158-1-201ENST00000583596 81 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC244505.7-201ENST00000599675 272 ntBASIC4.54□□□□□ -1.68
MBD4O95243 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 MRPS35P3-201ENST00000603189 709 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC245389.1-201ENST00000605141 529 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC027449.1-201ENST00000608890 407 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AP001521.1-201ENST00000609150 300 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC006133.1-201ENST00000617106 264 ntBASIC4.54□□□□□ -1.68
MBD4O95243 AC138649.5-201ENST00000637456 137 ntBASIC4.54□□□□□ -1.68
MBD4O95243 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.54□□□□□ -1.68
MBD4O95243 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MBD4O95243 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
MBD4O95243 MAPK10-253ENST00000641010 4072 ntBASIC4.53□□□□□ -1.68
MBD4O95243 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MBD4O95243 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
MBD4O95243 RNU6-216P-201ENST00000363282 104 ntBASIC4.53□□□□□ -1.68
MBD4O95243 RNU6-560P-201ENST00000364007 108 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms