Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 MIR4277-201ENST00000578298 84 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF3O43395 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF3O43395 IGHV3-29-201ENST00000604817 344 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC092354.1-201ENST00000606057 376 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC012360.2-201ENST00000609349 391 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC106028.5-201ENST00000610332 395 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF3O43395 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF3O43395 AC017104.4-201ENST00000636283 1592 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF3O43395 AL158163.1-201ENST00000603915 1649 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF3O43395 SCN1A-220ENST00000641603 12506 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF3O43395 AC091046.3-201ENST00000631455 1574 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 RNY4P24-201ENST00000362735 96 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 RAB28P1-201ENST00000411517 641 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 FAR2P2-201ENST00000413041 594 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 COX6CP17-201ENST00000421389 185 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PRPF3O43395 FAR2P4-202ENST00000425399 584 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC127537.2-201ENST00000439258 465 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 RPL21P133-201ENST00000443666 476 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF3O43395 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC079804.1-201ENST00000461922 436 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 RPL31P50-201ENST00000471002 296 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AC104164.2-201ENST00000496953 495 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AC022447.3-201ENST00000506865 495 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 TXNP6-201ENST00000510190 310 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 IGLV3-26-201ENST00000520756 302 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AC009643.1-201ENST00000532030 391 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF3O43395 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC015726.1-201ENST00000602353 681 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AL358072.1-201ENST00000604156 575 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 AL445363.3-201ENST00000623080 671 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PRPF3O43395 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 AC008013.2-202ENST00000637965 364 ntBASIC4.97□□□□□ -1.61
PRPF3O43395 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF3O43395 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF3O43395 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF3O43395 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PRPF3O43395 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
PRPF3O43395 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
PRPF3O43395 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF3O43395 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
PRPF3O43395 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF3O43395 AL161781.1-201ENST00000354277 403 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 Y_RNA.77-201ENST00000362962 107 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 RNU1-132P-201ENST00000364300 164 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 RNU6-821P-201ENST00000390995 107 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 RN7SKP235-201ENST00000410662 305 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AL160275.2-201ENST00000412010 394 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF3O43395 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 RBMY1KP-201ENST00000423480 476 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 RPL18P10-201ENST00000425606 538 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AC006548.1-201ENST00000427470 102 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 EZH2P1-201ENST00000431167 291 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 MTND5P14-201ENST00000441481 1267 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 FTH1P2-201ENST00000466086 412 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AC006499.5-201ENST00000505037 514 ntBASIC4.96□□□□□ -1.62
PRPF3O43395 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF3O43395 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.96□□□□□ -1.62
PRPF3O43395 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.96□□□□□ -1.62
PRPF3O43395 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms