Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 MAPK10-338ENST00000641647 3362 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HOXA3O43365 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 AC007529.1-201ENST00000418574 2178 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXA3O43365 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 RNU5E-8P-201ENST00000363502 116 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 U8.4-201ENST00000363626 134 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 RNU6-606P-201ENST00000384721 111 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 MIR765-201ENST00000390226 114 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AL122016.1-201ENST00000403365 367 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AL136116.1-201ENST00000403591 381 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.39□□□□□ -1.71
HOXA3O43365 AC096921.1-201ENST00000411661 375 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 RNF10P1-201ENST00000418589 369 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXA3O43365 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 REREP1Y-201ENST00000422655 198 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXA3O43365 EZH2P1-201ENST00000431167 291 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 GSTM5P1-201ENST00000434751 660 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 RPS20P5-201ENST00000434808 360 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC073410.1-201ENST00000435125 589 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 FTH1P1-201ENST00000437933 532 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 REREP2Y-201ENST00000439103 200 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 RPL12P3-201ENST00000440080 396 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 CEACAMP7-201ENST00000444105 496 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 AC010733.1-201ENST00000451515 401 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 RPS20P21-201ENST00000466859 343 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 RN7SL809P-201ENST00000482040 297 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 HMGB1P21-201ENST00000502313 581 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 COX7A2P2-201ENST00000505291 250 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 HSPD1P15-201ENST00000505573 1122 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 SCARNA15.1-201ENST00000516384 125 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 PSMA2P1-201ENST00000526365 646 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 AC093027.1-201ENST00000546698 429 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC087477.6-201ENST00000559595 843 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 AC009852.2-201ENST00000567898 485 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AP005403.1-201ENST00000579720 229 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA3O43365 AC105224.1-201ENST00000587055 421 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC243960.4-201ENST00000600532 288 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AL050343.2-201ENST00000607338 280 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 AC138965.3-201ENST00000623875 498 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA3O43365 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.39□□□□□ -1.71
HOXA3O43365 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA3O43365 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA3O43365 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HOXA3O43365 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA3O43365 AC068870.1-201ENST00000563737 2455 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXA3O43365 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA3O43365 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA3O43365 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA3O43365 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA3O43365 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA3O43365 RNA5SP326-201ENST00000363209 110 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 RNVU1-3-201ENST00000364313 161 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 RNU1-43P-201ENST00000365052 165 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 RNU6-996P-201ENST00000365438 107 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 SNORA16A-201ENST00000384342 137 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 MIR19A-201ENST00000384878 82 ntBASIC4.38□□□□□ -1.71
HOXA3O43365 RN7SKP32-201ENST00000410167 303 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms