Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 STMN1P2-201ENST00000508435 439 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 OR8L1P-201ENST00000534005 955 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXN3O00409 MIR4700-201ENST00000578311 74 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN3O00409 RN7SL52P-201ENST00000584271 284 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXN3O00409 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN3O00409 AC012409.3-201ENST00000611343 981 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AC073968.1-201ENST00000618594 637 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AC055839.1-201ENST00000634467 498 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXN3O00409 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
FOXN3O00409 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN3O00409 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN3O00409 AC087190.4-201ENST00000574616 8334 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN3O00409 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
FOXN3O00409 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
FOXN3O00409 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN3O00409 A2MP1-204ENST00000566278 4130 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 OR56B2P-202ENST00000641377 2453 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 XIAPP3-201ENST00000312918 795 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AL672167.1-206ENST00000356293 943 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 Y_RNA.51-201ENST00000362725 102 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 RNU6-263P-201ENST00000363811 107 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 MIR124-3-201ENST00000384866 87 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC097374.1-203ENST00000400783 485 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AL078595.1-201ENST00000404458 226 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 MIR1250-201ENST00000408098 113 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 RPL31P45-201ENST00000419532 356 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN3O00409 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AL772161.1-201ENST00000439130 476 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC002381.1-201ENST00000447049 280 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 ARPC3P5-201ENST00000448802 534 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 ABCF2P2-201ENST00000450549 296 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC012170.1-201ENST00000495139 359 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 VWA8P1-201ENST00000510889 176 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 AL117351.2-201ENST00000513571 157 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC015795.1-201ENST00000513669 327 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 RN7SKP92-201ENST00000517266 244 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC060788.1-201ENST00000521318 469 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 OR6C7P-201ENST00000547875 934 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC023161.2-201ENST00000551218 780 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN3O00409 CENPUP2-201ENST00000555897 1186 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC136618.2-201ENST00000575091 400 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AP001180.3-201ENST00000582221 145 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.68□□□□□ -1.66
FOXN3O00409 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN3O00409 LLPHP1-201ENST00000603571 367 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC092354.1-201ENST00000606057 376 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC080013.4-201ENST00000607624 649 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC092653.1-201ENST00000608509 531 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 HULC.1-201ENST00000612720 240 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 MIR7844-201ENST00000616161 122 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC019278.1-201ENST00000623516 479 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 AC006927.3-201ENST00000638789 384 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 AL356473.1-201ENST00000406203 1408 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN3O00409 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 AL359893.1-201ENST00000447628 1580 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
FOXN3O00409 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.68□□□□□ -1.66
FOXN3O00409 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.68□□□□□ -1.66
FOXN3O00409 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
FOXN3O00409 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.67□□□□□ -1.66
FOXN3O00409 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 MTND4P4-201ENST00000439033 1366 ntBASIC4.67□□□□□ -1.66
FOXN3O00409 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXN3O00409 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXN3O00409 MIR331-201ENST00000362302 94 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms