Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC006946.1-201ENST00000429106 328 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 YME1L1P1-201ENST00000429435 297 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AL034418.1-201ENST00000448675 860 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 COX6CP18-201ENST00000448769 222 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 HMGB3P22-202ENST00000451823 572 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 U8.18-201ENST00000459285 133 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 DYNLL1P6-201ENST00000503440 264 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 RNU6-276P-201ENST00000516114 96 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 RN7SKP157-201ENST00000516174 282 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 RNU1-95P-201ENST00000516357 160 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 RNU1-128P-201ENST00000516704 160 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC087369.1-201ENST00000520775 996 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AP003385.6-201ENST00000531603 374 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AL360157.1-201ENST00000565962 87 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AL121652.1-201ENST00000608851 448 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NPIPA2E9PIF3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC091152.2-201ENST00000591628 2569 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 RNU6-115P-201ENST00000364310 107 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 SNORD116-23-201ENST00000384645 92 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 RNU6-837P-201ENST00000391056 108 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL513174.1-201ENST00000423182 629 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL591419.1-201ENST00000427423 339 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL050321.1-201ENST00000432363 400 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 NEK4P1-201ENST00000433383 879 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 MTCYBP42-201ENST00000444653 1130 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 NANOGP10-201ENST00000453325 895 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 snoU13.3-201ENST00000459441 104 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 RN7SL330P-201ENST00000469709 307 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 GAPDHP39-201ENST00000481866 979 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 PRELID3BP6-201ENST00000503839 571 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 MTCYBP41-201ENST00000528913 1123 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 LSM6P2-201ENST00000552208 177 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 SNORD39.3-201ENST00000584451 71 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL355812.1-201ENST00000603215 216 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC096947.1-201ENST00000603233 470 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 SNORA51-201ENST00000606420 132 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL139022.2-201ENST00000606934 443 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC097504.2-201ENST00000608088 454 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 U7.8-201ENST00000619968 63 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AC004777.1-201ENST00000624317 287 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 BDP1P-201ENST00000582658 1990 ntBASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPIPA2E9PIF3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
NPIPA2E9PIF3 AL645568.2-201ENST00000432815 1337 ntBASIC3.46□□□□□ -1.85
NPIPA2E9PIF3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
NPIPA2E9PIF3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA2E9PIF3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.46□□□□□ -1.86
NPIPA2E9PIF3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA2E9PIF3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms