Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL136164.3-201ENST00000624429 3978 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 RNU6-433P-201ENST00000363216 104 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 SNORA71.2-201ENST00000364941 134 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 U3.15-201ENST00000365398 212 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC068538.1-201ENST00000376856 336 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC007066.1-201ENST00000392902 381 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 SDHCP2-201ENST00000398565 501 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL136133.1-201ENST00000413694 376 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 FNDC3CP-201ENST00000420795 1155 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 MTCO3P1-205ENST00000422088 832 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 RPS27AP7-201ENST00000422792 455 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC126182.1-201ENST00000478134 357 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC026979.1-201ENST00000492525 396 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC106872.2-201ENST00000494303 480 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 RNA5SP216-201ENST00000516111 123 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AF279873.1-201ENST00000523393 313 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 CBX3P5-201ENST00000552017 521 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC091488.1-201ENST00000604239 660 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC013476.2-201ENST00000614456 459 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL357080.1-201ENST00000617394 239 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AC010300.1-201ENST00000600671 5134 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 PABPC1P9-201ENST00000426076 1612 ntBASIC4.68□□□□□ -1.66
DKK3Q9UBP4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
DKK3Q9UBP4 AP000542.2-201ENST00000623199 6179 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC107068.1-201ENST00000563286 4218 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RNU6-462P-201ENST00000362659 105 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RNU6-1122P-201ENST00000384449 107 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 SNORA48.7-201ENST00000391302 135 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL450338.1-201ENST00000407987 512 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RN7SKP56-201ENST00000410513 331 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RPL21P32-201ENST00000419877 477 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 EIF1P1-201ENST00000421436 341 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC233981.1-201ENST00000423224 461 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RPL30P3-201ENST00000424262 333 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 PPIAP13-201ENST00000434706 478 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC004865.1-201ENST00000442276 1003 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RAB11AP1-201ENST00000442978 646 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 MTND4P18-201ENST00000447010 465 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 BNIP3P41-201ENST00000503774 571 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC025674.1-201ENST00000507074 324 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC109464.2-201ENST00000510242 943 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 FABP5P5-201ENST00000515537 406 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 RN7SKP92-201ENST00000517266 244 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC016957.1-201ENST00000534895 309 ntBASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.67□□□□□ -1.66
DKK3Q9UBP4 AC007424.1-203ENST00000554613 687 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms