Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 Y_RNA.676-201ENST00000516393 96 ntBASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 AC122134.1-201ENST00000565664 1104 ntBASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.62□□□□□ -1.83
PHRF1Q9P1Y6 AC007342.7-201ENST00000624610 2337 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 IPMKP1-201ENST00000425988 855 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 VDAC1P3-201ENST00000434069 851 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 RPS27P29-201ENST00000463110 252 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 RN7SL442P-201ENST00000473804 320 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 RNU6ATAC39P-201ENST00000516309 149 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 RN7SKP283-201ENST00000517197 270 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 UBTFL10-201ENST00000528532 562 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 AL356274.1-201ENST00000617064 410 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 CTSLP2-204ENST00000629029 392 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 AC016717.2-201ENST00000609089 5141 ntBASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHRF1Q9P1Y6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 SNORD62.1-201ENST00000362541 86 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 U8.2-201ENST00000363156 134 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 IFNA11P-201ENST00000446352 526 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC125238.1-201ENST00000448842 249 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC006445.2-201ENST00000510061 472 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 FAM60DP-201ENST00000524174 632 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 OR5AK3P-201ENST00000527486 1297 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC007621.1-201ENST00000604544 437 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC090115.4-201ENST00000609970 188 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC009039.2-201ENST00000624524 529 ntBASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PHRF1Q9P1Y6 AC092881.1-201ENST00000638218 2733 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 MIR592-201ENST00000384959 97 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 RPS4XP7-201ENST00000406274 780 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AL445213.1-201ENST00000412589 747 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AL049610.1-201ENST00000423374 372 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AC008837.1-201ENST00000511513 412 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AC096725.1-201ENST00000514266 313 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 RFPL1S-203ENST00000539579 330 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AC009163.5-201ENST00000575421 637 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 AC092593.1-201ENST00000515413 1815 ntBASIC3.59□□□□□ -1.83
PHRF1Q9P1Y6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 ATP5F1P5-201ENST00000526403 760 ntBASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.59□□□□□ -1.84
PHRF1Q9P1Y6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AC092079.1-201ENST00000558620 1985 ntBASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 RAD1P1-201ENST00000231383 813 ntBASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 YPEL5P1-201ENST00000419731 367 ntBASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AC002553.2-201ENST00000453217 340 ntBASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHRF1Q9P1Y6 EXTL2P1-201ENST00000446218 416 ntBASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 RNA5SP380-201ENST00000517190 98 ntBASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 RPL7P20-201ENST00000520308 745 ntBASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 AC068657.1-201ENST00000520807 306 ntBASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 MIR4635-201ENST00000583759 79 ntBASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.57□□□□□ -1.84
PHRF1Q9P1Y6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms