Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 VN1R7P-201ENST00000619242 903 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AP003485.2-201ENST00000623636 610 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 AC009039.2-201ENST00000624524 529 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 RNF6P1-201ENST00000444889 1784 ntBASIC4.27□□□□□ -1.73
UPF2Q9HAU5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF2Q9HAU5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC006042.3-201ENST00000454684 1469 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RPL32P3-201ENST00000359025 275 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNA5SP383-201ENST00000362934 120 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNU4-68P-201ENST00000364314 141 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AL590290.1-201ENST00000405336 380 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNA5SP317-201ENST00000410176 116 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNA5SP311-201ENST00000411290 116 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RN7SKP53-201ENST00000411337 315 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RPS24P7-201ENST00000416921 246 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AIMP1P1-201ENST00000418670 937 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AL049610.1-201ENST00000423374 372 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 NIPA2P1-201ENST00000426223 976 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC114755.5-201ENST00000447760 831 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 TXNP6-201ENST00000510190 310 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 NDUFB4P9-201ENST00000511646 388 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNA5SP315-201ENST00000516340 116 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNA5SP309-201ENST00000516670 106 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 MIR2276-201ENST00000516886 89 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNA5SP312-201ENST00000517068 116 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AP002812.4-201ENST00000532139 286 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 ATP5F1P7-201ENST00000567330 760 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC023824.3-201ENST00000569003 562 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC115085.1-201ENST00000588924 229 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AC004223.2-201ENST00000590309 544 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 RNU1-30P-201ENST00000606575 163 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 AP003072.4-201ENST00000624580 310 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 MTCO1P14-201ENST00000441695 1559 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 MFSD8-233ENST00000641482 4860 ntBASIC4.26□□□□□ -1.73
UPF2Q9HAU5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF2Q9HAU5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL136964.1-201ENST00000622038 2990 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 SPRR2C-201ENST00000290702 219 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 ANKRD36P1-201ENST00000344424 659 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 MIR30B-201ENST00000384850 88 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 RNU6-328P-201ENST00000390887 106 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL136310.1-201ENST00000404926 654 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC126124.2-201ENST00000413542 321 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC107081.1-201ENST00000414975 361 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL117339.2-201ENST00000430475 180 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 MTCYBP42-201ENST00000444653 1130 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC068135.1-201ENST00000446164 246 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC005002.1-201ENST00000447458 540 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC092685.1-201ENST00000447960 1243 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC112492.1-201ENST00000449607 712 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL133162.1-201ENST00000463228 453 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC010460.1-201ENST00000507087 466 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 SNORA64.4-201ENST00000516632 81 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 RANP9-201ENST00000519957 271 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 UBTFL10-201ENST00000528532 562 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 DEFB130C-202ENST00000530001 230 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC027104.1-201ENST00000563702 681 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC008507.1-201ENST00000587506 734 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC091057.2-201ENST00000602594 792 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC092954.1-201ENST00000609121 445 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AL450489.1-201ENST00000612071 468 ntBASIC4.25□□□□□ -1.73
UPF2Q9HAU5 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF2Q9HAU5 AC231759.1-201ENST00000616455 597 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms