Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 HMGB3P23-201ENST00000414981 585 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 OR4K6P-201ENST00000416478 897 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AL356320.2-201ENST00000417263 507 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 MTCO2P21-201ENST00000419780 677 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 MRPS18BP2-201ENST00000434310 759 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 SETD6P1-201ENST00000444575 317 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 RN7SL610P-201ENST00000463845 291 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC006511.1-201ENST00000470614 315 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 HMGB1P21-201ENST00000502313 581 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AP006245.1-201ENST00000522549 120 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC023050.2-201ENST00000544968 387 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 MTND4P33-201ENST00000556706 766 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 MIR4277-201ENST00000578298 84 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 MIR5708-201ENST00000579723 85 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 PCNAP1-202ENST00000595299 752 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 VN1R83P-201ENST00000595685 445 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AC113368.1-201ENST00000603736 382 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AP005137.2-201ENST00000609238 400 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 AP000676.4-201ENST00000624659 623 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 ZNF663P-202ENST00000641770 1131 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 OR52H1-202ENST00000641796 1061 ntBASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC28BQ9BUN5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 MIR30E-201ENST00000362104 92 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-413P-201ENST00000384115 107 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 MIR513B-201ENST00000385136 84 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 SNORA40.2-201ENST00000390847 128 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 SOD2P1-201ENST00000396543 562 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 RPS24P7-201ENST00000416921 246 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 RPL31P45-201ENST00000419532 356 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC092447.3-201ENST00000426027 686 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC068287.1-201ENST00000430283 295 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC004022.1-201ENST00000447766 1066 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 OR9M1P-201ENST00000459641 921 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 RPS27P23-201ENST00000487608 251 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 KCTD9P5-201ENST00000504141 1170 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 OR5H4P-201ENST00000510851 923 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 OR5D17P-201ENST00000531492 978 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC090695.1-201ENST00000561269 1222 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 MTND3P13-201ENST00000574391 343 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AP003117.2-201ENST00000606010 545 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AL021707.7-201ENST00000607991 416 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AP002782.1-201ENST00000623107 614 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AL732618.1-201ENST00000623251 301 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 AC068647.1-201ENST00000489539 2265 ntBASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC28BQ9BUN5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 HMGB1P5-201ENST00000255320 642 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-707P-201ENST00000364647 95 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 RNU6-1151P-201ENST00000384684 107 ntBASIC3.54□□□□□ -1.84
CCDC28BQ9BUN5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms