Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC131902.3-201ENST00000611767 581 ntBASIC4.36□□□□□ -1.71
SNX18Q96RF0 AC008250.2-201ENST00000615261 205 ntBASIC4.36□□□□□ -1.71
SNX18Q96RF0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.36□□□□□ -1.71
SNX18Q96RF0 AC091905.4-201ENST00000623432 202 ntBASIC4.36□□□□□ -1.71
SNX18Q96RF0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
SNX18Q96RF0 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
SNX18Q96RF0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX18Q96RF0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX18Q96RF0 AL672167.1-203ENST00000641299 2975 ntBASIC4.36□□□□□ -1.71
SNX18Q96RF0 AL445437.1-201ENST00000623157 3087 ntBASIC4.36□□□□□ -1.71
SNX18Q96RF0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SNX18Q96RF0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.36□□□□□ -1.71
SNX18Q96RF0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SNX18Q96RF0 AL356489.2-201ENST00000566968 3528 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 RNA5SP443-201ENST00000363083 132 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RNU6-289P-201ENST00000364093 107 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RHOT1P2-201ENST00000366423 333 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 SNORA51.8-201ENST00000384234 132 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RNU6-809P-201ENST00000384461 107 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 EIF5P1-201ENST00000400019 1231 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPS3AP23-201ENST00000401762 784 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 Y_RNA.625-201ENST00000411256 107 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 GJA6P-201ENST00000415117 1042 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPS3AP9-201ENST00000417027 792 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC104837.2-201ENST00000427236 424 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AL451139.1-201ENST00000434718 346 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 UBE2V1P8-201ENST00000437166 265 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC105402.2-201ENST00000438503 358 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 MTCO1P27-201ENST00000448269 226 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC026410.2-201ENST00000460281 156 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPS3AP41-201ENST00000462701 778 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPL7P22-201ENST00000466005 733 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 LARP1BP2-201ENST00000486594 519 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPL7P24-201ENST00000493052 752 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPS4XP18-201ENST00000495480 763 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 POU5F1P7-201ENST00000508759 541 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 LARP7P2-201ENST00000575306 125 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 MIR3913-1-201ENST00000577744 102 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 MIR544B-201ENST00000582372 78 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 FAM25E-202ENST00000608562 189 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC020634.1-201ENST00000608701 549 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC091953.3-201ENST00000623220 236 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC244258.1-201ENST00000637553 1071 ntBASIC4.35□□□□□ -1.71
SNX18Q96RF0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
SNX18Q96RF0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNX18Q96RF0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 RNA5SP502-201ENST00000362694 119 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 RNA5SP428-201ENST00000365129 132 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 SNORA51.6-201ENST00000384151 125 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNX18Q96RF0 ARF4P3-201ENST00000397387 509 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 BTF3P7-201ENST00000407097 488 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.34□□□□□ -1.71
SNX18Q96RF0 ISCA1P1-201ENST00000426679 387 ntBASIC4.34□□□□□ -1.71
SNX18Q96RF0 NPM1P34-201ENST00000428821 893 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms