Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SNORA50A-202ENST00000629536 136 ntBASIC3.38□□□□□ -1.87
C9orf72Q96LT7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.38□□□□□ -1.87
C9orf72Q96LT7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
C9orf72Q96LT7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 SNORD115-48-201ENST00000364764 76 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC023128.2-201ENST00000420880 1223 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 NEK4P1-201ENST00000433383 879 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC005019.1-201ENST00000436455 431 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 RNU6-775P-201ENST00000459318 96 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 RN7SL601P-201ENST00000471221 293 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC126121.1-201ENST00000482313 553 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC073522.1-201ENST00000483312 377 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 SNORA70.24-201ENST00000517233 118 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 C1DP5-201ENST00000525775 383 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AP003717.3-201ENST00000544832 1180 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 UBE2NP1-201ENST00000545592 458 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AL442163.2-201ENST00000553912 710 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC015917.1-201ENST00000579654 510 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC011468.4-201ENST00000603942 409 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC079610.2-201ENST00000604818 690 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 BX322635.1-201ENST00000605804 496 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AC018816.2-201ENST00000621460 353 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 ZNF90P1-201ENST00000480493 1951 ntBASIC3.37□□□□□ -1.87
C9orf72Q96LT7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.37□□□□□ -1.87
C9orf72Q96LT7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC107081.3-201ENST00000612715 2034 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 U3.11-201ENST00000364476 212 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 OR6K3-202ENST00000368146 996 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 TAF9BP2-201ENST00000400856 499 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 HMGB3P23-201ENST00000414981 585 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 ZNF965P-201ENST00000432501 817 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 RPL21P110-201ENST00000433345 446 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 B3GNT2P1-201ENST00000434960 952 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AL590399.6-201ENST00000446396 307 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 RPS4XP10-201ENST00000465034 731 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 TMEM248P1-201ENST00000510579 951 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 HIGD1AP3-201ENST00000515857 278 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 RNA5SP217-201ENST00000515959 91 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC104115.2-201ENST00000523026 687 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC011816.2-201ENST00000607089 556 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC090425.2-201ENST00000608818 501 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 uc_338.1-201ENST00000612113 180 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC090617.9-201ENST00000623751 147 ntBASIC3.36□□□□□ -1.87
C9orf72Q96LT7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
C9orf72Q96LT7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf72Q96LT7 MIR491-201ENST00000384877 84 ntBASIC3.35□□□□□ -1.87
C9orf72Q96LT7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
C9orf72Q96LT7 HSFY4P-201ENST00000415994 1181 ntBASIC3.35□□□□□ -1.87
C9orf72Q96LT7 AC012065.2-201ENST00000421295 375 ntBASIC3.35□□□□□ -1.87
C9orf72Q96LT7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms