Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 SNORA75-201ENST00000384158 137 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 ARF4P3-201ENST00000397387 509 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL357515.1-201ENST00000402967 542 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 CDK8P2-201ENST00000415020 547 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL807761.1-201ENST00000417622 171 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 UBTFL3-201ENST00000418934 1024 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 OR5BE1P-201ENST00000425977 939 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 NANOGP6-201ENST00000429190 847 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 MTND1P28-201ENST00000435623 950 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 H2AFZP5-201ENST00000446960 382 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL645939.1-201ENST00000453429 797 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 MTCO3P2-201ENST00000457365 171 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 UBTFL6-201ENST00000477929 1024 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 RPL23AP72-201ENST00000492447 435 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 SCARNA22-201ENST00000503991 125 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 PPBPP1-201ENST00000510807 373 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 RN7SKP92-201ENST00000517266 244 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 MTCYBP20-201ENST00000524239 1129 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 OR4A45P-201ENST00000529954 901 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL133457.1-201ENST00000564251 987 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 PCMTD1P2-201ENST00000565017 355 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 RN7SL690P-201ENST00000582087 240 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 RNU6-88P-201ENST00000606801 100 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AC103710.4-201ENST00000609301 899 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 AC078899.5-201ENST00000612475 178 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 MIR4727-201ENST00000622232 55 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 AL392088.2-201ENST00000637607 285 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 OR5BE1P-202ENST00000641168 1176 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 IQCB2P-201ENST00000401788 1633 ntBASIC4.49□□□□□ -1.69
VPS50Q96JG6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS50Q96JG6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS50Q96JG6 GDI2P1-201ENST00000429312 1336 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS50Q96JG6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
VPS50Q96JG6 RNA5SP191-201ENST00000362585 102 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 RNU6-462P-201ENST00000362659 105 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 SNORD74.4-201ENST00000364129 80 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 RNU6-1119P-201ENST00000384349 108 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 U3.30-201ENST00000391308 210 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 ZNF603P-201ENST00000405613 487 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 RNA5SP39-201ENST00000411245 120 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL663109.1-201ENST00000411498 844 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL591848.1-201ENST00000413092 322 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC234779.1-201ENST00000425910 285 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AL512649.1-201ENST00000428997 581 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC105402.2-201ENST00000438503 358 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 BMI1P1-201ENST00000445879 941 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC104651.2-201ENST00000447549 528 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC000111.2-201ENST00000448200 210 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC010733.1-201ENST00000451515 401 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 TPT1P7-201ENST00000458300 517 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 snoU13.7-201ENST00000459220 104 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 RPS15AP17-201ENST00000470598 390 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC008897.1-201ENST00000494006 347 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 TMEM251P1-201ENST00000503717 318 ntBASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.48□□□□□ -1.69
VPS50Q96JG6 AC109458.1-201ENST00000508858 316 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms