Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RNA5SP424-201ENST00000390988 115 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 SNORA11B-201ENST00000408175 129 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 OSTCP5-201ENST00000425293 453 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 RAC1P8-201ENST00000427086 527 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 MTCO1P53-201ENST00000441633 699 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 HMGB3P6-201ENST00000444896 598 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC079776.3-201ENST00000450665 370 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 NANOGP10-201ENST00000453325 895 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 snoU13.3-201ENST00000459441 104 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC108064.1-201ENST00000513791 460 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 SNORA48.10-201ENST00000516965 160 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC027309.2-201ENST00000520566 192 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 HIGD1AP5-201ENST00000529959 259 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 CYCSP30-201ENST00000546447 172 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC099489.2-201ENST00000574976 260 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 MIR3912-201ENST00000577566 105 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC107982.3-201ENST00000584957 985 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AL354976.1-201ENST00000613843 387 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 MIR6875-201ENST00000617506 72 ntBASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRAF3IP1Q8TDR0 MTND4P10-201ENST00000446199 1363 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AP001148.1-201ENST00000624124 2359 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU6-730P-201ENST00000383954 104 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU6-925P-201ENST00000384629 104 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 EIF5P1-201ENST00000400019 1231 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 LUZP4P1-201ENST00000415420 344 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC007390.1-201ENST00000415722 356 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 Z75741.2-201ENST00000417272 1167 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC244098.2-201ENST00000422068 99 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 RSL24D1P6-201ENST00000426934 401 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 PNPLA4P1-201ENST00000458328 305 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 RN7SL385P-201ENST00000468873 276 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC022034.3-201ENST00000471393 478 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC010301.1-201ENST00000473936 355 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 RN7SKP116-201ENST00000516902 319 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AL121766.1-201ENST00000547436 487 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AL389895.1-201ENST00000554127 252 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC006960.3-201ENST00000561845 705 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 ZNF192P1-203ENST00000565888 810 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 MIR4286-201ENST00000580651 93 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 IGHV3-29-201ENST00000604817 344 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 SNORA62.6-201ENST00000606322 83 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AL138478.1-201ENST00000612252 832 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC005344.1-201ENST00000613391 459 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 AP005901.5-201ENST00000545779 1796 ntBASIC3.89□□□□□ -1.79
TRAF3IP1Q8TDR0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU6-374P-201ENST00000364146 108 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 U1.1-201ENST00000384101 164 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 RNU6-339P-201ENST00000384310 107 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 PTMAP5-201ENST00000393073 333 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 HSPE1P26-201ENST00000405341 275 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 RNA5SP56-201ENST00000410277 118 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 HMGB3P20-201ENST00000417997 600 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 KRR1P1-201ENST00000419430 803 ntBASIC3.88□□□□□ -1.79
TRAF3IP1Q8TDR0 MTCO3P1-205ENST00000422088 832 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms