Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC017071.1-201ENST00000564407 2204 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 SNORA73.2-201ENST00000364946 201 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC073264.1-201ENST00000411508 416 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 RFESDP1-201ENST00000422350 461 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 RPL26P28-201ENST00000451325 435 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 snoU13.3-201ENST00000459441 104 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC010301.1-201ENST00000473936 355 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC020898.1-201ENST00000474167 787 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC087879.1-201ENST00000474343 374 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 IGKV2-26-201ENST00000518305 343 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC006557.5-201ENST00000603126 811 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC242628.1-201ENST00000606810 391 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AL034408.1-202ENST00000636088 415 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AC009093.8-201ENST00000641769 292 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 AL136520.1-201ENST00000600311 1322 ntBASIC3.19□□□□□ -1.9
CLHC1Q8NHS4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 RNU1-70P-201ENST00000362618 164 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 MIR142-201ENST00000384835 87 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 MIR554-201ENST00000384874 96 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC025750.1-201ENST00000399891 379 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL583834.1-201ENST00000406943 343 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 RN7SKP202-201ENST00000410439 330 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC233728.2-201ENST00000425348 757 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL513175.1-201ENST00000431492 780 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 HSPD1P21-201ENST00000436541 245 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL359073.1-201ENST00000448036 403 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 RPS23P3-201ENST00000470993 430 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 RPS26P21-201ENST00000475397 348 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC106707.2-201ENST00000484182 374 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 OR5H3P-201ENST00000502817 919 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC108157.1-201ENST00000510511 539 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 RNA5SP380-201ENST00000517190 98 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC139103.1-201ENST00000534696 1030 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC034268.2-201ENST00000571784 482 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 MIR1254-2-201ENST00000579553 63 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC015917.1-201ENST00000579654 510 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 MIR3922-201ENST00000585192 84 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL162713.1-201ENST00000604480 262 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 AC090897.3-201ENST00000636973 1157 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 CR383658.2-201ENST00000547576 1525 ntBASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLHC1Q8NHS4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 RNA5SP44-201ENST00000410446 133 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 BX323014.1-201ENST00000412876 237 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 BX842559.1-201ENST00000419615 532 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL355994.1-201ENST00000424379 260 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 RPL21P110-201ENST00000433345 446 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 SNRPEP4-201ENST00000435815 279 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AC125238.1-201ENST00000448842 249 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL445669.2-201ENST00000454425 421 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 AL136126.1-201ENST00000473603 402 ntBASIC3.17□□□□□ -1.9
CLHC1Q8NHS4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms