Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MTND4P2-201ENST00000507767 1203 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC009163.5-201ENST00000575421 637 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 CYCSP41-201ENST00000616920 296 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 BX005019.1-201ENST00000561881 1810 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 U3.12-201ENST00000364498 214 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 Y_RNA.508-201ENST00000384502 114 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AL445528.1-201ENST00000426330 420 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 MTCYBP31-201ENST00000438855 1122 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 DEFB122-202ENST00000569013 197 ntBASIC0.91□□□□□ -2.26
SYNE1Q8NF91 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
SYNE1Q8NF91 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AP001486.2-201ENST00000561652 5113 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 MTND4LP21-201ENST00000415303 295 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AL353597.2-202ENST00000434901 373 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 IGKV2D-23-201ENST00000518179 286 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 OR11H5P-201ENST00000554039 926 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AL360085.1-201ENST00000604713 532 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AC067852.7-201ENST00000623270 535 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 RPL35AP12-201ENST00000425362 338 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 MTCO3P16-201ENST00000454456 754 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AC133134.1-201ENST00000466800 359 ntBASIC0.9□□□□□ -2.26
SYNE1Q8NF91 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC0.9□□□□□ -2.26
SYNE1Q8NF91 RN7SKP44-201ENST00000363602 316 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 MIR764-201ENST00000390811 85 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 B3GNT2P1-201ENST00000434960 952 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RPS29P21-201ENST00000496272 170 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 NARSP2-201ENST00000518524 679 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC122134.1-201ENST00000565664 1104 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC234778.2-201ENST00000566241 354 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL592148.1-201ENST00000413568 445 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 HMGB3P6-201ENST00000444896 598 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC021146.5-201ENST00000503544 545 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC034159.1-201ENST00000513885 583 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC004825.2-201ENST00000616634 455 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 PLCE1P1-201ENST00000622094 305 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC009039.2-201ENST00000624524 529 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 IGHVIII-44-202ENST00000636235 289 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RNA5SP107-201ENST00000411358 122 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL603825.1-201ENST00000438481 80 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC128713.1-201ENST00000471495 306 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 SNORA64.4-201ENST00000516632 81 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 NPM1P35-201ENST00000533043 868 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL110115.1-201ENST00000614396 364 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AP004607.9-201ENST00000618202 316 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC017002.4-201ENST00000604721 1525 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RNU6-851P-201ENST00000384565 107 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC098592.2-201ENST00000413158 265 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 DUTP6-201ENST00000425573 462 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC0.9□□□□□ -2.27
SYNE1Q8NF91 NECAP1P2-201ENST00000455668 727 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 AC005229.2-201ENST00000456995 399 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RNU7-157P-201ENST00000459600 66 ntBASIC0.9□□□□□ -2.27
SYNE1Q8NF91 RPL31P13-201ENST00000484151 370 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms