Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AP000860.1-201ENST00000605250 559 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC016727.1-205ENST00000605437 569 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC104458.1-201ENST00000608243 463 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC006338.1-201ENST00000618453 749 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC079228.1-201ENST00000624774 1049 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 RNF6P1-201ENST00000444889 1784 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AL136164.3-201ENST00000624429 3978 ntBASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC44A3Q8N4M1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 Y_RNA.70-201ENST00000362886 110 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RNU5F-7P-201ENST00000363696 115 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RNU1-130P-201ENST00000363930 160 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RNU1-132P-201ENST00000364300 164 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RNU4-12P-201ENST00000365233 139 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-723P-201ENST00000383973 107 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RN7SKP16-201ENST00000410180 299 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC092634.6-201ENST00000418558 192 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AIMP1P1-201ENST00000418670 937 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RPL7P4-203ENST00000430239 730 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RPS7P5-201ENST00000441482 581 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RNA5SP103-201ENST00000459503 118 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RPL7P24-201ENST00000493052 752 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC098799.2-201ENST00000509466 868 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 ARL2BPP6-201ENST00000512757 439 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 RPS27AP18-201ENST00000515536 459 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 Y_RNA.702-201ENST00000516843 96 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC122134.1-201ENST00000565664 1104 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 MIR3913-1-201ENST00000577744 102 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC131902.3-201ENST00000611767 581 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC023509.5-201ENST00000617434 807 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AL121890.2-201ENST00000617644 465 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC138649.3-201ENST00000622154 254 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AC145207.9-201ENST00000623802 325 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 CRYM-AS1-204ENST00000637983 556 ntBASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC44A3Q8N4M1 AL031985.3-201ENST00000565390 2449 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SPRR2C-201ENST00000290702 219 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 OR5P1P-201ENST00000299512 925 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RNU4-44P-201ENST00000363050 141 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RNU6-216P-201ENST00000363282 104 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SNORA72.1-201ENST00000363485 129 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 Y_RNA.813-201ENST00000364639 102 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 Y_RNA.450-201ENST00000384198 113 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RNA5SP171-201ENST00000391071 115 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RNU2-6P-201ENST00000411404 190 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 MTCO1P17-201ENST00000411522 491 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RPS27AP14-201ENST00000422868 454 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AL953862.1-201ENST00000423016 168 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AC098614.3-201ENST00000438957 440 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 MTATP6P30-201ENST00000443540 664 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 Z99127.3-201ENST00000448158 395 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 RPL7L1P1-201ENST00000448259 785 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 NPM1P39-201ENST00000449818 867 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC44A3Q8N4M1 SNRPFP4-201ENST00000456366 242 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms