Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AL445435.1-201ENST00000604232 665 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AC091167.4-201ENST00000605079 184 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 RNU4-5P-201ENST00000607255 135 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AC069200.1-201ENST00000609511 323 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 U7.8-201ENST00000619968 63 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AL157770.1-201ENST00000623049 439 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 AC004943.3-201ENST00000624116 600 ntBASIC3.55□□□□□ -1.84
CCDC71Q8IV32 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC71Q8IV32 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC107081.3-201ENST00000612715 2034 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC073073.2-201ENST00000609827 2578 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 ZNF29P-201ENST00000225587 168 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 U1.1-201ENST00000384101 164 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RPL7AP73-201ENST00000413490 353 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC093578.1-201ENST00000415219 368 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 Z75741.2-201ENST00000417272 1167 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 NANOGP5-201ENST00000424456 877 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 MOB1AP1-201ENST00000430903 535 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AL513175.1-201ENST00000431492 780 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 USP9YP24-201ENST00000434374 697 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 USP9YP17-201ENST00000444617 696 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RPL7P59-201ENST00000447700 943 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC112492.1-201ENST00000449607 712 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RPL7P49-201ENST00000471402 708 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC084198.1-201ENST00000477747 402 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC108729.1-201ENST00000487812 947 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC048346.1-201ENST00000510247 144 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC110792.2-201ENST00000510278 224 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 OR5H4P-201ENST00000510851 923 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC005351.1-201ENST00000511152 786 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC021146.1-201ENST00000511202 716 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 PAICSP4-201ENST00000517543 1253 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AL132857.1-201ENST00000555180 708 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AL121895.2-201ENST00000619558 447 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AL139089.1-201ENST00000620372 975 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 OR6C71P-202ENST00000641886 1107 ntBASIC3.54□□□□□ -1.84
CCDC71Q8IV32 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.54□□□□□ -1.84
CCDC71Q8IV32 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 ZNF285B-201ENST00000561698 1767 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 SAGE4P-201ENST00000442271 3381 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 SNORA63.1-201ENST00000362493 131 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 RNU6-283P-201ENST00000364788 107 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 RNU6-1293P-201ENST00000384077 107 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 AL136310.1-201ENST00000404926 654 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 RPS3AP25-201ENST00000411660 793 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 AC127526.1-201ENST00000417526 366 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 AC008280.1-201ENST00000418851 412 ntBASIC3.53□□□□□ -1.84
CCDC71Q8IV32 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC71Q8IV32 AC233981.1-201ENST00000423224 461 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms