Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC239868.2-201ENST00000564237 4527 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 Y_RNA.212-201ENST00000364177 102 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 MIR19A-201ENST00000384878 82 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 MIR92A2-201ENST00000385299 75 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AL009179.1-201ENST00000406085 265 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RN7SKP247-201ENST00000411094 308 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 HMGN1P24-201ENST00000412282 298 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RPSAP35-201ENST00000413753 818 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AKR1B10P1-201ENST00000425765 942 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 OR2AS1P-201ENST00000427827 319 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 PSMA6P3-201ENST00000428242 164 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 MTATP6P16-201ENST00000434543 526 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC099670.2-201ENST00000435130 321 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC064862.4-201ENST00000442180 334 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RPL21P89-201ENST00000444021 467 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 EEF1B2P6-201ENST00000445713 673 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RPL36AP39-201ENST00000445859 318 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 ARL2BPP10-201ENST00000446487 531 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AL450023.1-201ENST00000450868 751 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AZGP1P2-201ENST00000454506 345 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC024558.1-201ENST00000505008 528 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC093303.1-201ENST00000514549 295 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-347P-201ENST00000516658 105 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RNA5SP503-201ENST00000517047 117 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AP001804.3-201ENST00000525146 880 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 IGBP1P1-201ENST00000554337 1009 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 MIR4703-201ENST00000577728 79 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 MIR3614-201ENST00000581261 86 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 MIR6861-201ENST00000618657 64 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 uc_338.22-201ENST00000622722 187 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 AC091925.1-201ENST00000623204 462 ntBASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.31□□□□□ -1.56
UBE3DQ7Z6J8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RNA5SP46-201ENST00000362370 120 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RN7SKP185-201ENST00000362813 326 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 SNORD113-7-201ENST00000363762 77 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RNU6-82P-201ENST00000363970 107 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RPL37P10-201ENST00000412884 288 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 BMS1P17-202ENST00000416720 316 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AL139396.1-201ENST00000421137 167 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 PMCHL1-202ENST00000423102 261 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 EZH2P1-201ENST00000431167 291 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 FTH1P1-201ENST00000437933 532 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AL137792.2-201ENST00000443484 235 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC02210-201ENST00000444561 288 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 SNRPFP3-201ENST00000457792 225 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RPS29P15-201ENST00000458329 171 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RN7SL72P-201ENST00000460697 269 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC090602.1-201ENST00000469695 252 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 RN7SL583P-201ENST00000475692 287 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC083904.1-201ENST00000487828 231 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AL139099.1-201ENST00000497398 403 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 GLUD1P3-202ENST00000508551 200 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC098591.2-201ENST00000510152 315 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 SMURF2P1-201ENST00000514992 481 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AC018442.3-201ENST00000523025 183 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 MTND4P7-201ENST00000523876 130 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 DEFB109D-201ENST00000529497 240 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 OR4P1P-201ENST00000530808 1136 ntBASIC5.3□□□□□ -1.56
UBE3DQ7Z6J8 AP000857.1-201ENST00000532151 543 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms