Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 RNU6-874P-201ENST00000362390 105 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 SNORA62.2-201ENST00000364672 152 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.463-201ENST00000384271 102 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 ARL5AP1-201ENST00000418991 388 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 HSFY6P-201ENST00000445573 403 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC008571.1-201ENST00000467232 300 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 RPS27P27-201ENST00000498779 255 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC097473.1-201ENST00000508142 408 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.661-201ENST00000516003 99 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 RNU2-53P-201ENST00000516257 147 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 RNA5SP454-201ENST00000517231 127 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 MYL12AP1-201ENST00000518490 515 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 GSTP1P1-201ENST00000548078 319 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC005341.1-201ENST00000571086 708 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC087783.2-201ENST00000605070 562 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC004805.2-201ENST00000605382 482 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AL391813.2-201ENST00000609113 322 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 AC243312.2-201ENST00000623340 601 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 CR381572.1-201ENST00000625098 102 ntBASIC6.92□□□□□ -1.3
RC3H1Q5TC82 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RC3H1Q5TC82 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 INTS6P1-201ENST00000504674 2530 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC004972.1-201ENST00000623934 2209 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 RNA5SP123-201ENST00000363244 119 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.396-201ENST00000383949 103 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.512-201ENST00000384518 102 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AL139396.1-201ENST00000421137 167 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC009127.1-201ENST00000467090 155 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 RPL31P50-201ENST00000471002 296 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 GZMAP1-201ENST00000503054 631 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AK3P4-201ENST00000504283 583 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC004980.4-201ENST00000513375 203 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC008083.2-201ENST00000546707 476 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AL352984.2-202ENST00000613699 155 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 PLCE1P1-201ENST00000622094 305 ntBASIC6.91□□□□□ -1.3
RC3H1Q5TC82 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RC3H1Q5TC82 XPOTP1-201ENST00000443317 2398 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC025125.1-201ENST00000624743 1922 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 RNU1-136P-201ENST00000384181 164 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 Y_RNA.645-201ENST00000391229 102 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 CYB5AP4-201ENST00000396692 399 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AL078599.1-201ENST00000402075 293 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 RN7SKP126-201ENST00000411143 300 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 AC096921.1-201ENST00000411661 375 ntBASIC6.9□□□□□ -1.3
RC3H1Q5TC82 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.9□□□□□ -1.3
RC3H1Q5TC82 SKA2P1-201ENST00000425592 390 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms