Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AL590233.1-201ENST00000430017 456 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 MRPS18BP2-201ENST00000434310 759 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 SETD6P1-201ENST00000444575 317 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC012671.1-201ENST00000451912 203 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 RN7SL354P-201ENST00000469282 294 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC007686.1-201ENST00000488511 463 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 AP001781.1-201ENST00000530977 207 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC007834.2-201ENST00000536310 343 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 OSBPL9P5-201ENST00000542581 171 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC38Q502W7 MIR4270-201ENST00000581799 70 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC090616.5-202ENST00000582111 297 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 AL031667.3-201ENST00000620124 655 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 AC040168.1-201ENST00000623594 991 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC38Q502W7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CCDC38Q502W7 ZNF962P-201ENST00000443465 3140 ntBASIC4.54□□□□□ -1.68
CCDC38Q502W7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC011477.1-204ENST00000623416 1325 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 RNU6-952P-201ENST00000391164 108 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 RNU4-78P-201ENST00000410940 126 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL365396.1-201ENST00000430854 671 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 MUPP-201ENST00000438111 566 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL645939.1-201ENST00000453429 797 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL445669.2-201ENST00000454425 421 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 RNU7-125P-201ENST00000458760 62 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 snoU109.4-201ENST00000458953 143 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC010326.1-201ENST00000462726 602 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 RPL31P50-201ENST00000471002 296 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC093853.1-201ENST00000515689 483 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 HIGD1AP5-201ENST00000529959 259 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 HMGB1P50-201ENST00000605814 607 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 HMGN2P28-201ENST00000606102 262 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 Z98200.1-201ENST00000607298 470 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC004825.2-201ENST00000616634 455 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC007671.2-201ENST00000637344 619 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC38Q502W7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 AL022578.1-201ENST00000439330 1433 ntBASIC4.53□□□□□ -1.68
CCDC38Q502W7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC38Q502W7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.53□□□□□ -1.69
CCDC38Q502W7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC38Q502W7 RN7SKP44-201ENST00000363602 316 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 RNA5SP88-201ENST00000365560 109 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 SNRPFP1-201ENST00000414761 252 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.52□□□□□ -1.69
CCDC38Q502W7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC38Q502W7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms